Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Gm9025-201ENSMUST00000122415 1575 ntBASIC14.87□□□□□ -0.03
Trex1Q91XB0 AC113060.1-201ENSMUST00000225689 1573 ntBASIC14.87□□□□□ -0.03
Trex1Q91XB0 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trex1Q91XB0 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trex1Q91XB0 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trex1Q91XB0 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC14.87□□□□□ -0.03
Trex1Q91XB0 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trex1Q91XB0 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC14.87□□□□□ -0.03
Trex1Q91XB0 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trex1Q91XB0 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trex1Q91XB0 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC14.87□□□□□ -0.03
Trex1Q91XB0 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trex1Q91XB0 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC14.87□□□□□ -0.03
Trex1Q91XB0 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC14.87□□□□□ -0.03
Trex1Q91XB0 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC14.87□□□□□ -0.03
Trex1Q91XB0 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC14.87□□□□□ -0.03
Trex1Q91XB0 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trex1Q91XB0 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.87□□□□□ -0.03
Trex1Q91XB0 AC167013.1-201ENSMUST00000228592 202 ntBASIC14.87□□□□□ -0.03
Trex1Q91XB0 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trex1Q91XB0 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trex1Q91XB0 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trex1Q91XB0 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trex1Q91XB0 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trex1Q91XB0 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trex1Q91XB0 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trex1Q91XB0 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trex1Q91XB0 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trex1Q91XB0 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Trex1Q91XB0 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trex1Q91XB0 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.86□□□□□ -0.03
Trex1Q91XB0 AC122314.1-201ENSMUST00000223056 2239 ntBASIC14.86□□□□□ -0.03
Trex1Q91XB0 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trex1Q91XB0 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trex1Q91XB0 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trex1Q91XB0 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.86□□□□□ -0.03
Trex1Q91XB0 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trex1Q91XB0 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trex1Q91XB0 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trex1Q91XB0 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trex1Q91XB0 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trex1Q91XB0 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trex1Q91XB0 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC14.86□□□□□ -0.03
Trex1Q91XB0 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trex1Q91XB0 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Trex1Q91XB0 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trex1Q91XB0 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trex1Q91XB0 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trex1Q91XB0 Mir7070-201ENSMUST00000183657 86 ntBASIC14.86□□□□□ -0.03
Trex1Q91XB0 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trex1Q91XB0 Gm5869-201ENSMUST00000200248 1257 ntBASIC14.86□□□□□ -0.03
Trex1Q91XB0 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trex1Q91XB0 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trex1Q91XB0 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trex1Q91XB0 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trex1Q91XB0 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trex1Q91XB0 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC14.86□□□□□ -0.03
Trex1Q91XB0 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trex1Q91XB0 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.86□□□□□ -0.03
Trex1Q91XB0 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trex1Q91XB0 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trex1Q91XB0 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trex1Q91XB0 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trex1Q91XB0 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trex1Q91XB0 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trex1Q91XB0 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trex1Q91XB0 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trex1Q91XB0 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Trex1Q91XB0 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trex1Q91XB0 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trex1Q91XB0 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trex1Q91XB0 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trex1Q91XB0 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trex1Q91XB0 AC113441.2-201ENSMUST00000221538 1468 ntBASIC14.85□□□□□ -0.03
Trex1Q91XB0 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trex1Q91XB0 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trex1Q91XB0 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC14.85□□□□□ -0.03
Trex1Q91XB0 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC14.85□□□□□ -0.03
Trex1Q91XB0 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC14.85□□□□□ -0.03
Trex1Q91XB0 Gm8908-201ENSMUST00000121633 1024 ntBASIC14.85□□□□□ -0.03
Trex1Q91XB0 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trex1Q91XB0 Gm38317-201ENSMUST00000195564 343 ntBASIC14.85□□□□□ -0.03
Trex1Q91XB0 Gm45186-201ENSMUST00000206874 478 ntBASIC14.85□□□□□ -0.03
Trex1Q91XB0 Gm44967-201ENSMUST00000207047 631 ntBASIC14.85□□□□□ -0.03
Trex1Q91XB0 Gm13097-201ENSMUST00000210722 397 ntBASIC14.85□□□□□ -0.03
Trex1Q91XB0 Gm5363-201ENSMUST00000211927 938 ntBASIC14.85□□□□□ -0.03
Trex1Q91XB0 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trex1Q91XB0 Gm15459-201ENSMUST00000117405 1941 ntBASIC14.85□□□□□ -0.03
Trex1Q91XB0 Gm8355-201ENSMUST00000177767 1941 ntBASIC14.85□□□□□ -0.03
Trex1Q91XB0 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trex1Q91XB0 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trex1Q91XB0 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trex1Q91XB0 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trex1Q91XB0 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trex1Q91XB0 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.85□□□□□ -0.03
Trex1Q91XB0 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trex1Q91XB0 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trex1Q91XB0 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trex1Q91XB0 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trex1Q91XB0 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms