Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tram1Q91V04 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tram1Q91V04 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tram1Q91V04 Gm12428-201ENSMUST00000119844 727 ntBASIC11.21□□□□□ -0.61
Tram1Q91V04 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
Tram1Q91V04 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC11.21□□□□□ -0.61
Tram1Q91V04 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Tram1Q91V04 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC11.21□□□□□ -0.61
Tram1Q91V04 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC11.21□□□□□ -0.61
Tram1Q91V04 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tram1Q91V04 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Tram1Q91V04 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tram1Q91V04 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Tram1Q91V04 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Tram1Q91V04 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Tram1Q91V04 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Tram1Q91V04 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Tram1Q91V04 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Tram1Q91V04 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Tram1Q91V04 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Tram1Q91V04 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Tram1Q91V04 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Tram1Q91V04 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Tram1Q91V04 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Tram1Q91V04 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Tram1Q91V04 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Tram1Q91V04 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Tram1Q91V04 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Tram1Q91V04 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Tram1Q91V04 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Tram1Q91V04 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tram1Q91V04 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tram1Q91V04 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tram1Q91V04 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tram1Q91V04 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Tram1Q91V04 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.2□□□□□ -0.62
Tram1Q91V04 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tram1Q91V04 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tram1Q91V04 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tram1Q91V04 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tram1Q91V04 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tram1Q91V04 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.2□□□□□ -0.62
Tram1Q91V04 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.2□□□□□ -0.62
Tram1Q91V04 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Tram1Q91V04 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tram1Q91V04 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Tram1Q91V04 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tram1Q91V04 Gm12585-201ENSMUST00000117307 290 ntBASIC11.2□□□□□ -0.62
Tram1Q91V04 Gm11745-201ENSMUST00000121669 448 ntBASIC11.2□□□□□ -0.62
Tram1Q91V04 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tram1Q91V04 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.2□□□□□ -0.62
Tram1Q91V04 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tram1Q91V04 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tram1Q91V04 Gm18733-201ENSMUST00000173950 856 ntBASIC11.2□□□□□ -0.62
Tram1Q91V04 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Tram1Q91V04 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Tram1Q91V04 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Tram1Q91V04 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tram1Q91V04 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Tram1Q91V04 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Tram1Q91V04 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Tram1Q91V04 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Tram1Q91V04 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.2□□□□□ -0.62
Tram1Q91V04 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tram1Q91V04 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tram1Q91V04 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tram1Q91V04 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Tram1Q91V04 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.2□□□□□ -0.62
Tram1Q91V04 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tram1Q91V04 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tram1Q91V04 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.2□□□□□ -0.62
Tram1Q91V04 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Tram1Q91V04 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tram1Q91V04 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tram1Q91V04 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Tram1Q91V04 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.2□□□□□ -0.62
Tram1Q91V04 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Tram1Q91V04 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Tram1Q91V04 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.2□□□□□ -0.62
Tram1Q91V04 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tram1Q91V04 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tram1Q91V04 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tram1Q91V04 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tram1Q91V04 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Tram1Q91V04 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tram1Q91V04 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Tram1Q91V04 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.19□□□□□ -0.62
Tram1Q91V04 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tram1Q91V04 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.19□□□□□ -0.62
Tram1Q91V04 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Tram1Q91V04 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tram1Q91V04 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tram1Q91V04 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Tram1Q91V04 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Tram1Q91V04 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Tram1Q91V04 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tram1Q91V04 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Tram1Q91V04 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tram1Q91V04 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Tram1Q91V04 Gm44124-201ENSMUST00000204159 472 ntBASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms