Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
H1fooQ8VIK3 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
H1fooQ8VIK3 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
H1fooQ8VIK3 Gm44851-201ENSMUST00000205735 2309 ntBASIC10.92□□□□□ -0.66
H1fooQ8VIK3 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
H1fooQ8VIK3 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
H1fooQ8VIK3 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
H1fooQ8VIK3 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
H1fooQ8VIK3 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
H1fooQ8VIK3 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
H1fooQ8VIK3 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
H1fooQ8VIK3 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
H1fooQ8VIK3 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
H1fooQ8VIK3 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
H1fooQ8VIK3 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
H1fooQ8VIK3 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
H1fooQ8VIK3 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
H1fooQ8VIK3 Gm5303-201ENSMUST00000117943 1252 ntBASIC10.92□□□□□ -0.66
H1fooQ8VIK3 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
H1fooQ8VIK3 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
H1fooQ8VIK3 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC10.92□□□□□ -0.66
H1fooQ8VIK3 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
H1fooQ8VIK3 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
H1fooQ8VIK3 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
H1fooQ8VIK3 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
H1fooQ8VIK3 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC10.92□□□□□ -0.66
H1fooQ8VIK3 Gm7446-201ENSMUST00000221035 1240 ntBASIC10.92□□□□□ -0.66
H1fooQ8VIK3 AC173210.1-201ENSMUST00000222341 1131 ntBASIC10.92□□□□□ -0.66
H1fooQ8VIK3 AC238811.3-201ENSMUST00000225422 709 ntBASIC10.92□□□□□ -0.66
H1fooQ8VIK3 Itm2b-204ENSMUST00000228637 783 ntBASIC10.92□□□□□ -0.66
H1fooQ8VIK3 AC154276.1-201ENSMUST00000228874 1299 ntBASIC10.92□□□□□ -0.66
H1fooQ8VIK3 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
H1fooQ8VIK3 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
H1fooQ8VIK3 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
H1fooQ8VIK3 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
H1fooQ8VIK3 Gm15823-201ENSMUST00000064305 670 ntBASIC10.92□□□□□ -0.66
H1fooQ8VIK3 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
H1fooQ8VIK3 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
H1fooQ8VIK3 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC10.92□□□□□ -0.66
H1fooQ8VIK3 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
H1fooQ8VIK3 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
H1fooQ8VIK3 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
H1fooQ8VIK3 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC10.92□□□□□ -0.66
H1fooQ8VIK3 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
H1fooQ8VIK3 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC10.92□□□□□ -0.66
H1fooQ8VIK3 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
H1fooQ8VIK3 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
H1fooQ8VIK3 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
H1fooQ8VIK3 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
H1fooQ8VIK3 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
H1fooQ8VIK3 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
H1fooQ8VIK3 AC151895.1-201ENSMUST00000219025 1742 ntBASIC10.92□□□□□ -0.66
H1fooQ8VIK3 Abhd6-203ENSMUST00000225234 1958 ntBASIC10.92□□□□□ -0.66
H1fooQ8VIK3 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
H1fooQ8VIK3 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
H1fooQ8VIK3 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
H1fooQ8VIK3 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC10.92□□□□□ -0.66
H1fooQ8VIK3 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
H1fooQ8VIK3 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
H1fooQ8VIK3 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
H1fooQ8VIK3 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
H1fooQ8VIK3 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H1fooQ8VIK3 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H1fooQ8VIK3 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
H1fooQ8VIK3 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
H1fooQ8VIK3 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
H1fooQ8VIK3 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
H1fooQ8VIK3 Gm18630-201ENSMUST00000222109 1397 ntBASIC10.91□□□□□ -0.66
H1fooQ8VIK3 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H1fooQ8VIK3 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H1fooQ8VIK3 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
H1fooQ8VIK3 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC10.91□□□□□ -0.66
H1fooQ8VIK3 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
H1fooQ8VIK3 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
H1fooQ8VIK3 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
H1fooQ8VIK3 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
H1fooQ8VIK3 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
H1fooQ8VIK3 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H1fooQ8VIK3 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H1fooQ8VIK3 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
H1fooQ8VIK3 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
H1fooQ8VIK3 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H1fooQ8VIK3 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
H1fooQ8VIK3 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H1fooQ8VIK3 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
H1fooQ8VIK3 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC10.91□□□□□ -0.66
H1fooQ8VIK3 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
H1fooQ8VIK3 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H1fooQ8VIK3 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H1fooQ8VIK3 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
H1fooQ8VIK3 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H1fooQ8VIK3 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H1fooQ8VIK3 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
H1fooQ8VIK3 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC10.91□□□□□ -0.66
H1fooQ8VIK3 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
H1fooQ8VIK3 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
H1fooQ8VIK3 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
H1fooQ8VIK3 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H1fooQ8VIK3 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H1fooQ8VIK3 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms