Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retreg1dQ8VE91 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Retreg1dQ8VE91 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retreg1dQ8VE91 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Retreg1dQ8VE91 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Retreg1dQ8VE91 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retreg1dQ8VE91 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Retreg1dQ8VE91 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.95□□□□□ -0.34
Retreg1dQ8VE91 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Retreg1dQ8VE91 Gm8213-201ENSMUST00000118191 441 ntBASIC12.95□□□□□ -0.34
Retreg1dQ8VE91 Gm12203-201ENSMUST00000118235 598 ntBASIC12.95□□□□□ -0.34
Retreg1dQ8VE91 Gm12209-201ENSMUST00000120089 596 ntBASIC12.95□□□□□ -0.34
Retreg1dQ8VE91 Gm16177-201ENSMUST00000120728 718 ntBASIC12.95□□□□□ -0.34
Retreg1dQ8VE91 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.95□□□□□ -0.34
Retreg1dQ8VE91 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retreg1dQ8VE91 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.95□□□□□ -0.34
Retreg1dQ8VE91 Snora78-201ENSMUST00000158630 128 ntBASIC12.95□□□□□ -0.34
Retreg1dQ8VE91 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.95□□□□□ -0.34
Retreg1dQ8VE91 Gm27331-201ENSMUST00000183705 60 ntBASIC12.95□□□□□ -0.34
Retreg1dQ8VE91 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.95□□□□□ -0.34
Retreg1dQ8VE91 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.95□□□□□ -0.34
Retreg1dQ8VE91 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.95□□□□□ -0.34
Retreg1dQ8VE91 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.95□□□□□ -0.34
Retreg1dQ8VE91 Gm29705-201ENSMUST00000212598 474 ntBASIC12.95□□□□□ -0.34
Retreg1dQ8VE91 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.95□□□□□ -0.34
Retreg1dQ8VE91 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retreg1dQ8VE91 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retreg1dQ8VE91 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Retreg1dQ8VE91 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retreg1dQ8VE91 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Retreg1dQ8VE91 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Retreg1dQ8VE91 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.95□□□□□ -0.34
Retreg1dQ8VE91 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retreg1dQ8VE91 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retreg1dQ8VE91 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.95□□□□□ -0.34
Retreg1dQ8VE91 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Retreg1dQ8VE91 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Retreg1dQ8VE91 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retreg1dQ8VE91 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retreg1dQ8VE91 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.94□□□□□ -0.34
Retreg1dQ8VE91 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retreg1dQ8VE91 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Retreg1dQ8VE91 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retreg1dQ8VE91 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.94□□□□□ -0.34
Retreg1dQ8VE91 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Retreg1dQ8VE91 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retreg1dQ8VE91 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.94□□□□□ -0.34
Retreg1dQ8VE91 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.94□□□□□ -0.34
Retreg1dQ8VE91 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retreg1dQ8VE91 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retreg1dQ8VE91 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retreg1dQ8VE91 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Retreg1dQ8VE91 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Retreg1dQ8VE91 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.94□□□□□ -0.34
Retreg1dQ8VE91 Gm37424-201ENSMUST00000191727 561 ntBASIC12.94□□□□□ -0.34
Retreg1dQ8VE91 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.94□□□□□ -0.34
Retreg1dQ8VE91 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Retreg1dQ8VE91 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retreg1dQ8VE91 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retreg1dQ8VE91 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Retreg1dQ8VE91 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retreg1dQ8VE91 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retreg1dQ8VE91 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retreg1dQ8VE91 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retreg1dQ8VE91 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retreg1dQ8VE91 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Retreg1dQ8VE91 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retreg1dQ8VE91 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retreg1dQ8VE91 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.94□□□□□ -0.34
Retreg1dQ8VE91 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retreg1dQ8VE91 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retreg1dQ8VE91 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retreg1dQ8VE91 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retreg1dQ8VE91 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Retreg1dQ8VE91 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Retreg1dQ8VE91 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retreg1dQ8VE91 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Retreg1dQ8VE91 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Retreg1dQ8VE91 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.93□□□□□ -0.34
Retreg1dQ8VE91 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Retreg1dQ8VE91 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.93□□□□□ -0.34
Retreg1dQ8VE91 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Retreg1dQ8VE91 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retreg1dQ8VE91 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retreg1dQ8VE91 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Retreg1dQ8VE91 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retreg1dQ8VE91 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Retreg1dQ8VE91 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Retreg1dQ8VE91 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.93□□□□□ -0.34
Retreg1dQ8VE91 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.93□□□□□ -0.34
Retreg1dQ8VE91 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retreg1dQ8VE91 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retreg1dQ8VE91 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Retreg1dQ8VE91 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retreg1dQ8VE91 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Retreg1dQ8VE91 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retreg1dQ8VE91 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retreg1dQ8VE91 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retreg1dQ8VE91 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retreg1dQ8VE91 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 92.5 ms