Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ndc1Q8VCB1 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ndc1Q8VCB1 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ndc1Q8VCB1 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ndc1Q8VCB1 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ndc1Q8VCB1 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ndc1Q8VCB1 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ndc1Q8VCB1 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ndc1Q8VCB1 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ndc1Q8VCB1 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ndc1Q8VCB1 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ndc1Q8VCB1 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ndc1Q8VCB1 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ndc1Q8VCB1 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ndc1Q8VCB1 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ndc1Q8VCB1 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ndc1Q8VCB1 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ndc1Q8VCB1 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ndc1Q8VCB1 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ndc1Q8VCB1 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ndc1Q8VCB1 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ndc1Q8VCB1 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ndc1Q8VCB1 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ndc1Q8VCB1 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ndc1Q8VCB1 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ndc1Q8VCB1 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.3□□□□□ -0.44
Ndc1Q8VCB1 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ndc1Q8VCB1 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ndc1Q8VCB1 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ndc1Q8VCB1 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ndc1Q8VCB1 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ndc1Q8VCB1 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ndc1Q8VCB1 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ndc1Q8VCB1 Gm15198-201ENSMUST00000117283 177 ntBASIC12.3□□□□□ -0.44
Ndc1Q8VCB1 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.3□□□□□ -0.44
Ndc1Q8VCB1 Gm8805-201ENSMUST00000117848 313 ntBASIC12.3□□□□□ -0.44
Ndc1Q8VCB1 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ndc1Q8VCB1 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.3□□□□□ -0.44
Ndc1Q8VCB1 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.3□□□□□ -0.44
Ndc1Q8VCB1 Gm7029-201ENSMUST00000173226 450 ntBASIC12.3□□□□□ -0.44
Ndc1Q8VCB1 Gm26927-201ENSMUST00000182385 965 ntBASIC12.3□□□□□ -0.44
Ndc1Q8VCB1 Gm37008-201ENSMUST00000195712 319 ntBASIC12.3□□□□□ -0.44
Ndc1Q8VCB1 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.3□□□□□ -0.44
Ndc1Q8VCB1 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ndc1Q8VCB1 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.3□□□□□ -0.44
Ndc1Q8VCB1 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.3□□□□□ -0.44
Ndc1Q8VCB1 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ndc1Q8VCB1 Gm7399-201ENSMUST00000032395 858 ntBASIC12.3□□□□□ -0.44
Ndc1Q8VCB1 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ndc1Q8VCB1 Gm9823-201ENSMUST00000051212 327 ntBASIC12.3□□□□□ -0.44
Ndc1Q8VCB1 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Ndc1Q8VCB1 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ndc1Q8VCB1 Olfr582-201ENSMUST00000098212 960 ntBASIC12.3□□□□□ -0.44
Ndc1Q8VCB1 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ndc1Q8VCB1 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ndc1Q8VCB1 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ndc1Q8VCB1 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ndc1Q8VCB1 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.3□□□□□ -0.44
Ndc1Q8VCB1 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ndc1Q8VCB1 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.3□□□□□ -0.44
Ndc1Q8VCB1 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ndc1Q8VCB1 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ndc1Q8VCB1 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ndc1Q8VCB1 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.29□□□□□ -0.44
Ndc1Q8VCB1 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ndc1Q8VCB1 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ndc1Q8VCB1 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Ndc1Q8VCB1 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ndc1Q8VCB1 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ndc1Q8VCB1 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ndc1Q8VCB1 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ndc1Q8VCB1 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Ndc1Q8VCB1 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ndc1Q8VCB1 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ndc1Q8VCB1 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ndc1Q8VCB1 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.29□□□□□ -0.44
Ndc1Q8VCB1 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ndc1Q8VCB1 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ndc1Q8VCB1 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.29□□□□□ -0.44
Ndc1Q8VCB1 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.29□□□□□ -0.44
Ndc1Q8VCB1 Gm6013-201ENSMUST00000212264 699 ntBASIC12.29□□□□□ -0.44
Ndc1Q8VCB1 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ndc1Q8VCB1 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ndc1Q8VCB1 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ndc1Q8VCB1 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ndc1Q8VCB1 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ndc1Q8VCB1 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ndc1Q8VCB1 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Ndc1Q8VCB1 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ndc1Q8VCB1 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ndc1Q8VCB1 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ndc1Q8VCB1 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ndc1Q8VCB1 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.29□□□□□ -0.44
Ndc1Q8VCB1 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ndc1Q8VCB1 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ndc1Q8VCB1 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ndc1Q8VCB1 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Ndc1Q8VCB1 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.29□□□□□ -0.44
Ndc1Q8VCB1 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ndc1Q8VCB1 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms