Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm1Q8VC85 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.5□□□□□ -0.41
Lsm1Q8VC85 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.5□□□□□ -0.41
Lsm1Q8VC85 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.5□□□□□ -0.41
Lsm1Q8VC85 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm1Q8VC85 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Lsm1Q8VC85 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Lsm1Q8VC85 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm1Q8VC85 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Lsm1Q8VC85 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm1Q8VC85 Gm28631-201ENSMUST00000190740 334 ntBASIC12.5□□□□□ -0.41
Lsm1Q8VC85 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.5□□□□□ -0.41
Lsm1Q8VC85 Gm44855-201ENSMUST00000205725 362 ntBASIC12.5□□□□□ -0.41
Lsm1Q8VC85 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.5□□□□□ -0.41
Lsm1Q8VC85 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.5□□□□□ -0.41
Lsm1Q8VC85 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm1Q8VC85 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm1Q8VC85 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm1Q8VC85 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC12.5□□□□□ -0.41
Lsm1Q8VC85 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm1Q8VC85 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm1Q8VC85 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm1Q8VC85 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm1Q8VC85 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Lsm1Q8VC85 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm1Q8VC85 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Lsm1Q8VC85 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm1Q8VC85 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12.49□□□□□ -0.41
Lsm1Q8VC85 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.49□□□□□ -0.41
Lsm1Q8VC85 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.49□□□□□ -0.41
Lsm1Q8VC85 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm1Q8VC85 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.49□□□□□ -0.41
Lsm1Q8VC85 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm1Q8VC85 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm1Q8VC85 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm1Q8VC85 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm1Q8VC85 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm1Q8VC85 Gm14350-201ENSMUST00000116642 640 ntBASIC12.49□□□□□ -0.41
Lsm1Q8VC85 Gm5687-201ENSMUST00000118252 640 ntBASIC12.49□□□□□ -0.41
Lsm1Q8VC85 Gm14057-201ENSMUST00000120631 482 ntBASIC12.49□□□□□ -0.41
Lsm1Q8VC85 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm1Q8VC85 Mir7654-201ENSMUST00000185082 70 ntBASIC12.49□□□□□ -0.41
Lsm1Q8VC85 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.49□□□□□ -0.41
Lsm1Q8VC85 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm1Q8VC85 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm1Q8VC85 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm1Q8VC85 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm1Q8VC85 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.49□□□□□ -0.41
Lsm1Q8VC85 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm1Q8VC85 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm1Q8VC85 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.49□□□□□ -0.41
Lsm1Q8VC85 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm1Q8VC85 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Lsm1Q8VC85 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm1Q8VC85 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm1Q8VC85 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm1Q8VC85 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm1Q8VC85 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm1Q8VC85 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm1Q8VC85 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Lsm1Q8VC85 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm1Q8VC85 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm1Q8VC85 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm1Q8VC85 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.48□□□□□ -0.41
Lsm1Q8VC85 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm1Q8VC85 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.48□□□□□ -0.41
Lsm1Q8VC85 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Lsm1Q8VC85 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm1Q8VC85 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm1Q8VC85 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm1Q8VC85 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm1Q8VC85 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Lsm1Q8VC85 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm1Q8VC85 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm1Q8VC85 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm1Q8VC85 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Lsm1Q8VC85 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm1Q8VC85 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm1Q8VC85 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm1Q8VC85 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.48□□□□□ -0.41
Lsm1Q8VC85 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm1Q8VC85 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.48□□□□□ -0.41
Lsm1Q8VC85 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.48□□□□□ -0.41
Lsm1Q8VC85 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm1Q8VC85 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm1Q8VC85 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.48□□□□□ -0.41
Lsm1Q8VC85 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm1Q8VC85 Itm2b-204ENSMUST00000228637 783 ntBASIC12.48□□□□□ -0.41
Lsm1Q8VC85 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm1Q8VC85 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm1Q8VC85 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.48□□□□□ -0.41
Lsm1Q8VC85 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm1Q8VC85 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm1Q8VC85 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Lsm1Q8VC85 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm1Q8VC85 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm1Q8VC85 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm1Q8VC85 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm1Q8VC85 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Lsm1Q8VC85 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 105.8 ms