Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Rnf8Q8VC56 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.6□□□□□ -0.39
Rnf8Q8VC56 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf8Q8VC56 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf8Q8VC56 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf8Q8VC56 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf8Q8VC56 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Rnf8Q8VC56 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf8Q8VC56 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf8Q8VC56 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf8Q8VC56 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf8Q8VC56 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Rnf8Q8VC56 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf8Q8VC56 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf8Q8VC56 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf8Q8VC56 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf8Q8VC56 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf8Q8VC56 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf8Q8VC56 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Rnf8Q8VC56 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf8Q8VC56 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf8Q8VC56 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf8Q8VC56 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.59□□□□□ -0.39
Rnf8Q8VC56 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf8Q8VC56 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Rnf8Q8VC56 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf8Q8VC56 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf8Q8VC56 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf8Q8VC56 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.59□□□□□ -0.39
Rnf8Q8VC56 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf8Q8VC56 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf8Q8VC56 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Rnf8Q8VC56 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf8Q8VC56 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf8Q8VC56 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf8Q8VC56 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf8Q8VC56 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf8Q8VC56 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf8Q8VC56 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf8Q8VC56 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf8Q8VC56 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Rnf8Q8VC56 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf8Q8VC56 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf8Q8VC56 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Rnf8Q8VC56 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
Rnf8Q8VC56 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Rnf8Q8VC56 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Rnf8Q8VC56 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf8Q8VC56 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf8Q8VC56 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf8Q8VC56 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf8Q8VC56 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf8Q8VC56 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Rnf8Q8VC56 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf8Q8VC56 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf8Q8VC56 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf8Q8VC56 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf8Q8VC56 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Rnf8Q8VC56 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Rnf8Q8VC56 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf8Q8VC56 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf8Q8VC56 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Rnf8Q8VC56 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf8Q8VC56 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf8Q8VC56 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf8Q8VC56 Gm11524-201ENSMUST00000119349 807 ntBASIC12.58□□□□□ -0.4
Rnf8Q8VC56 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf8Q8VC56 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf8Q8VC56 Mir6392-201ENSMUST00000184924 108 ntBASIC12.58□□□□□ -0.4
Rnf8Q8VC56 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf8Q8VC56 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.58□□□□□ -0.4
Rnf8Q8VC56 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf8Q8VC56 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Rnf8Q8VC56 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf8Q8VC56 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf8Q8VC56 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf8Q8VC56 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf8Q8VC56 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf8Q8VC56 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf8Q8VC56 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Rnf8Q8VC56 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Rnf8Q8VC56 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.58□□□□□ -0.4
Rnf8Q8VC56 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf8Q8VC56 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Rnf8Q8VC56 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf8Q8VC56 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf8Q8VC56 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf8Q8VC56 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Rnf8Q8VC56 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf8Q8VC56 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Rnf8Q8VC56 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf8Q8VC56 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf8Q8VC56 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf8Q8VC56 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf8Q8VC56 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf8Q8VC56 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rnf8Q8VC56 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf8Q8VC56 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf8Q8VC56 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rnf8Q8VC56 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms