Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sf3a1Q8K4Z5 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Sf3a1Q8K4Z5 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sf3a1Q8K4Z5 AC238940.1-201ENSMUST00000225106 1858 ntBASIC15.95■□□□□ 0.14
Sf3a1Q8K4Z5 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sf3a1Q8K4Z5 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sf3a1Q8K4Z5 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sf3a1Q8K4Z5 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Sf3a1Q8K4Z5 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sf3a1Q8K4Z5 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Sf3a1Q8K4Z5 Gm5939-201ENSMUST00000119613 2874 ntBASIC15.94■□□□□ 0.14
Sf3a1Q8K4Z5 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sf3a1Q8K4Z5 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sf3a1Q8K4Z5 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sf3a1Q8K4Z5 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Sf3a1Q8K4Z5 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Sf3a1Q8K4Z5 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sf3a1Q8K4Z5 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sf3a1Q8K4Z5 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC15.94■□□□□ 0.14
Sf3a1Q8K4Z5 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Sf3a1Q8K4Z5 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC15.94■□□□□ 0.14
Sf3a1Q8K4Z5 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC15.94■□□□□ 0.14
Sf3a1Q8K4Z5 AC122459.1-201ENSMUST00000228373 885 ntBASIC15.94■□□□□ 0.14
Sf3a1Q8K4Z5 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Sf3a1Q8K4Z5 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sf3a1Q8K4Z5 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Sf3a1Q8K4Z5 Gm14608-201ENSMUST00000120030 1553 ntBASIC15.94■□□□□ 0.14
Sf3a1Q8K4Z5 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sf3a1Q8K4Z5 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Sf3a1Q8K4Z5 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sf3a1Q8K4Z5 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Sf3a1Q8K4Z5 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sf3a1Q8K4Z5 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Sf3a1Q8K4Z5 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sf3a1Q8K4Z5 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sf3a1Q8K4Z5 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sf3a1Q8K4Z5 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sf3a1Q8K4Z5 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Sf3a1Q8K4Z5 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC15.93■□□□□ 0.14
Sf3a1Q8K4Z5 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sf3a1Q8K4Z5 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sf3a1Q8K4Z5 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sf3a1Q8K4Z5 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Sf3a1Q8K4Z5 Gm42829-201ENSMUST00000198417 2585 ntBASIC15.93■□□□□ 0.14
Sf3a1Q8K4Z5 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sf3a1Q8K4Z5 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Sf3a1Q8K4Z5 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Sf3a1Q8K4Z5 Gm9025-201ENSMUST00000122415 1575 ntBASIC15.93■□□□□ 0.14
Sf3a1Q8K4Z5 AC113060.1-201ENSMUST00000225689 1573 ntBASIC15.93■□□□□ 0.14
Sf3a1Q8K4Z5 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sf3a1Q8K4Z5 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Sf3a1Q8K4Z5 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC15.93■□□□□ 0.14
Sf3a1Q8K4Z5 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Sf3a1Q8K4Z5 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Sf3a1Q8K4Z5 Cdk7-205ENSMUST00000225990 1159 ntBASIC15.93■□□□□ 0.14
Sf3a1Q8K4Z5 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sf3a1Q8K4Z5 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sf3a1Q8K4Z5 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sf3a1Q8K4Z5 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sf3a1Q8K4Z5 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Sf3a1Q8K4Z5 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sf3a1Q8K4Z5 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sf3a1Q8K4Z5 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC15.93■□□□□ 0.14
Sf3a1Q8K4Z5 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sf3a1Q8K4Z5 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC15.93■□□□□ 0.14
Sf3a1Q8K4Z5 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Sf3a1Q8K4Z5 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sf3a1Q8K4Z5 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Sf3a1Q8K4Z5 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Sf3a1Q8K4Z5 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC15.92■□□□□ 0.14
Sf3a1Q8K4Z5 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC15.92■□□□□ 0.14
Sf3a1Q8K4Z5 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Sf3a1Q8K4Z5 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sf3a1Q8K4Z5 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sf3a1Q8K4Z5 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Sf3a1Q8K4Z5 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sf3a1Q8K4Z5 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sf3a1Q8K4Z5 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sf3a1Q8K4Z5 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Sf3a1Q8K4Z5 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sf3a1Q8K4Z5 AC137842.1-201ENSMUST00000227896 2064 ntBASIC15.92■□□□□ 0.14
Sf3a1Q8K4Z5 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sf3a1Q8K4Z5 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Sf3a1Q8K4Z5 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
Sf3a1Q8K4Z5 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sf3a1Q8K4Z5 Gm12539-201ENSMUST00000121549 1098 ntBASIC15.92■□□□□ 0.14
Sf3a1Q8K4Z5 Gm2231-201ENSMUST00000125661 612 ntBASIC15.92■□□□□ 0.14
Sf3a1Q8K4Z5 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Sf3a1Q8K4Z5 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC15.92■□□□□ 0.14
Sf3a1Q8K4Z5 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Sf3a1Q8K4Z5 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
Sf3a1Q8K4Z5 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Sf3a1Q8K4Z5 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC15.92■□□□□ 0.14
Sf3a1Q8K4Z5 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Sf3a1Q8K4Z5 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Sf3a1Q8K4Z5 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sf3a1Q8K4Z5 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC15.92■□□□□ 0.14
Sf3a1Q8K4Z5 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Sf3a1Q8K4Z5 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sf3a1Q8K4Z5 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms