Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp2bQ8BJF9 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp2bQ8BJF9 Mir6956-201ENSMUST00000183598 62 ntBASIC13.36□□□□□ -0.27
Chmp2bQ8BJF9 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp2bQ8BJF9 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Chmp2bQ8BJF9 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp2bQ8BJF9 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp2bQ8BJF9 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp2bQ8BJF9 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp2bQ8BJF9 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Chmp2bQ8BJF9 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp2bQ8BJF9 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp2bQ8BJF9 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp2bQ8BJF9 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp2bQ8BJF9 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp2bQ8BJF9 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp2bQ8BJF9 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Chmp2bQ8BJF9 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp2bQ8BJF9 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp2bQ8BJF9 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.36□□□□□ -0.27
Chmp2bQ8BJF9 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp2bQ8BJF9 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp2bQ8BJF9 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Chmp2bQ8BJF9 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp2bQ8BJF9 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp2bQ8BJF9 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chmp2bQ8BJF9 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.36□□□□□ -0.27
Chmp2bQ8BJF9 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp2bQ8BJF9 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC13.35□□□□□ -0.27
Chmp2bQ8BJF9 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp2bQ8BJF9 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp2bQ8BJF9 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp2bQ8BJF9 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.35□□□□□ -0.27
Chmp2bQ8BJF9 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp2bQ8BJF9 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.35□□□□□ -0.27
Chmp2bQ8BJF9 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp2bQ8BJF9 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.35□□□□□ -0.27
Chmp2bQ8BJF9 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.35□□□□□ -0.27
Chmp2bQ8BJF9 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.35□□□□□ -0.27
Chmp2bQ8BJF9 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp2bQ8BJF9 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp2bQ8BJF9 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp2bQ8BJF9 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Chmp2bQ8BJF9 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp2bQ8BJF9 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp2bQ8BJF9 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp2bQ8BJF9 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp2bQ8BJF9 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Chmp2bQ8BJF9 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp2bQ8BJF9 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.35□□□□□ -0.27
Chmp2bQ8BJF9 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Chmp2bQ8BJF9 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.35□□□□□ -0.27
Chmp2bQ8BJF9 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.35□□□□□ -0.27
Chmp2bQ8BJF9 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp2bQ8BJF9 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.35□□□□□ -0.27
Chmp2bQ8BJF9 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp2bQ8BJF9 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp2bQ8BJF9 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp2bQ8BJF9 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp2bQ8BJF9 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.35□□□□□ -0.27
Chmp2bQ8BJF9 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp2bQ8BJF9 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp2bQ8BJF9 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp2bQ8BJF9 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp2bQ8BJF9 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.35□□□□□ -0.27
Chmp2bQ8BJF9 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.35□□□□□ -0.27
Chmp2bQ8BJF9 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp2bQ8BJF9 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp2bQ8BJF9 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp2bQ8BJF9 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp2bQ8BJF9 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp2bQ8BJF9 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp2bQ8BJF9 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp2bQ8BJF9 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp2bQ8BJF9 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp2bQ8BJF9 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp2bQ8BJF9 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp2bQ8BJF9 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp2bQ8BJF9 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp2bQ8BJF9 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp2bQ8BJF9 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Chmp2bQ8BJF9 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.34□□□□□ -0.27
Chmp2bQ8BJF9 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp2bQ8BJF9 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp2bQ8BJF9 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.34□□□□□ -0.27
Chmp2bQ8BJF9 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp2bQ8BJF9 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp2bQ8BJF9 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.34□□□□□ -0.27
Chmp2bQ8BJF9 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.34□□□□□ -0.27
Chmp2bQ8BJF9 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp2bQ8BJF9 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Chmp2bQ8BJF9 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp2bQ8BJF9 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Chmp2bQ8BJF9 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp2bQ8BJF9 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp2bQ8BJF9 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp2bQ8BJF9 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp2bQ8BJF9 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp2bQ8BJF9 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.34□□□□□ -0.27
Chmp2bQ8BJF9 CT025678.1-201ENSMUST00000214795 2972 ntBASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms