Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Samm50Q8BGH2 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC15.27■□□□□ 0.04
Samm50Q8BGH2 Gm5466-201ENSMUST00000119395 1890 ntBASIC15.27■□□□□ 0.04
Samm50Q8BGH2 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC15.27■□□□□ 0.04
Samm50Q8BGH2 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Samm50Q8BGH2 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Samm50Q8BGH2 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC15.27■□□□□ 0.04
Samm50Q8BGH2 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Samm50Q8BGH2 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Samm50Q8BGH2 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC15.27■□□□□ 0.04
Samm50Q8BGH2 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Samm50Q8BGH2 Gm16342-201ENSMUST00000124025 1025 ntBASIC15.27■□□□□ 0.04
Samm50Q8BGH2 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC15.27■□□□□ 0.04
Samm50Q8BGH2 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC15.27■□□□□ 0.04
Samm50Q8BGH2 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Samm50Q8BGH2 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Samm50Q8BGH2 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Samm50Q8BGH2 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Samm50Q8BGH2 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Samm50Q8BGH2 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Samm50Q8BGH2 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Samm50Q8BGH2 Gm5356-201ENSMUST00000093326 615 ntBASIC15.27■□□□□ 0.04
Samm50Q8BGH2 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Samm50Q8BGH2 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Samm50Q8BGH2 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Samm50Q8BGH2 Gm38385-201ENSMUST00000194454 2351 ntBASIC15.27■□□□□ 0.03
Samm50Q8BGH2 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC15.27■□□□□ 0.03
Samm50Q8BGH2 Gm17435-202ENSMUST00000212699 1998 ntBASIC15.27■□□□□ 0.03
Samm50Q8BGH2 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Samm50Q8BGH2 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Samm50Q8BGH2 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Samm50Q8BGH2 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Samm50Q8BGH2 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Samm50Q8BGH2 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Samm50Q8BGH2 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Samm50Q8BGH2 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Samm50Q8BGH2 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Samm50Q8BGH2 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Samm50Q8BGH2 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Samm50Q8BGH2 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Samm50Q8BGH2 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC15.26■□□□□ 0.03
Samm50Q8BGH2 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Samm50Q8BGH2 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Samm50Q8BGH2 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Samm50Q8BGH2 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Samm50Q8BGH2 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Samm50Q8BGH2 Mir874-201ENSMUST00000104769 76 ntBASIC15.26■□□□□ 0.03
Samm50Q8BGH2 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Samm50Q8BGH2 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Samm50Q8BGH2 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC15.26■□□□□ 0.03
Samm50Q8BGH2 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Samm50Q8BGH2 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Samm50Q8BGH2 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC15.26■□□□□ 0.03
Samm50Q8BGH2 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC15.26■□□□□ 0.03
Samm50Q8BGH2 AC125117.1-201ENSMUST00000228121 468 ntBASIC15.26■□□□□ 0.03
Samm50Q8BGH2 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Samm50Q8BGH2 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Samm50Q8BGH2 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Samm50Q8BGH2 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Samm50Q8BGH2 Gm24447-201ENSMUST00000083977 338 ntBASIC15.26■□□□□ 0.03
Samm50Q8BGH2 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Samm50Q8BGH2 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Samm50Q8BGH2 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC15.26■□□□□ 0.03
Samm50Q8BGH2 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Samm50Q8BGH2 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Samm50Q8BGH2 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Samm50Q8BGH2 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Samm50Q8BGH2 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Samm50Q8BGH2 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Samm50Q8BGH2 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Samm50Q8BGH2 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Samm50Q8BGH2 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Samm50Q8BGH2 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC15.25■□□□□ 0.03
Samm50Q8BGH2 AC241621.2-201ENSMUST00000223991 2151 ntBASIC15.25■□□□□ 0.03
Samm50Q8BGH2 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Samm50Q8BGH2 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Samm50Q8BGH2 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Samm50Q8BGH2 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Samm50Q8BGH2 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Samm50Q8BGH2 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Samm50Q8BGH2 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC15.25■□□□□ 0.03
Samm50Q8BGH2 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Samm50Q8BGH2 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Samm50Q8BGH2 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Samm50Q8BGH2 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Samm50Q8BGH2 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Samm50Q8BGH2 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Samm50Q8BGH2 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Samm50Q8BGH2 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC15.25■□□□□ 0.03
Samm50Q8BGH2 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Samm50Q8BGH2 Gm18187-201ENSMUST00000196476 984 ntBASIC15.25■□□□□ 0.03
Samm50Q8BGH2 Gm45841-201ENSMUST00000207700 164 ntBASIC15.25■□□□□ 0.03
Samm50Q8BGH2 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Samm50Q8BGH2 Gm6983-201ENSMUST00000214912 628 ntBASIC15.25■□□□□ 0.03
Samm50Q8BGH2 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC15.25■□□□□ 0.03
Samm50Q8BGH2 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC15.25■□□□□ 0.03
Samm50Q8BGH2 Gm45743-201ENSMUST00000212701 2795 ntBASIC15.25■□□□□ 0.03
Samm50Q8BGH2 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Samm50Q8BGH2 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Samm50Q8BGH2 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms