Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ttc28Q80XJ3 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
Ttc28Q80XJ3 Gm38577-201ENSMUST00000221531 4545 ntBASIC10.89□□□□□ -0.67
Ttc28Q80XJ3 Gm44999-201ENSMUST00000207456 1493 ntBASIC10.89□□□□□ -0.67
Ttc28Q80XJ3 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Ttc28Q80XJ3 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC10.89□□□□□ -0.67
Ttc28Q80XJ3 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Ttc28Q80XJ3 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ttc28Q80XJ3 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ttc28Q80XJ3 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ttc28Q80XJ3 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ttc28Q80XJ3 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ttc28Q80XJ3 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ttc28Q80XJ3 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ttc28Q80XJ3 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ttc28Q80XJ3 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ttc28Q80XJ3 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ttc28Q80XJ3 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ttc28Q80XJ3 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC10.89□□□□□ -0.67
Ttc28Q80XJ3 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ttc28Q80XJ3 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ttc28Q80XJ3 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC10.89□□□□□ -0.67
Ttc28Q80XJ3 Gm5369-201ENSMUST00000217499 588 ntBASIC10.89□□□□□ -0.67
Ttc28Q80XJ3 Gm3318-201ENSMUST00000217604 1183 ntBASIC10.89□□□□□ -0.67
Ttc28Q80XJ3 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ttc28Q80XJ3 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ttc28Q80XJ3 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
Ttc28Q80XJ3 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC10.88□□□□□ -0.67
Ttc28Q80XJ3 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ttc28Q80XJ3 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ttc28Q80XJ3 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ttc28Q80XJ3 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC10.88□□□□□ -0.67
Ttc28Q80XJ3 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ttc28Q80XJ3 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ttc28Q80XJ3 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ttc28Q80XJ3 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ttc28Q80XJ3 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ttc28Q80XJ3 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC10.88□□□□□ -0.67
Ttc28Q80XJ3 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Ttc28Q80XJ3 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC10.88□□□□□ -0.67
Ttc28Q80XJ3 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC10.88□□□□□ -0.67
Ttc28Q80XJ3 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ttc28Q80XJ3 Gm9061-201ENSMUST00000182707 1006 ntBASIC10.88□□□□□ -0.67
Ttc28Q80XJ3 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC10.88□□□□□ -0.67
Ttc28Q80XJ3 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC10.88□□□□□ -0.67
Ttc28Q80XJ3 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC10.88□□□□□ -0.67
Ttc28Q80XJ3 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC10.88□□□□□ -0.67
Ttc28Q80XJ3 AC159103.1-201ENSMUST00000228325 429 ntBASIC10.88□□□□□ -0.67
Ttc28Q80XJ3 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ttc28Q80XJ3 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Ttc28Q80XJ3 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Ttc28Q80XJ3 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC10.88□□□□□ -0.67
Ttc28Q80XJ3 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ttc28Q80XJ3 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ttc28Q80XJ3 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Ttc28Q80XJ3 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
Ttc28Q80XJ3 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Ttc28Q80XJ3 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ttc28Q80XJ3 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Ttc28Q80XJ3 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Ttc28Q80XJ3 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ttc28Q80XJ3 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ttc28Q80XJ3 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ttc28Q80XJ3 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ttc28Q80XJ3 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC10.88□□□□□ -0.67
Ttc28Q80XJ3 Gm28182-201ENSMUST00000188354 2477 ntBASIC10.88□□□□□ -0.67
Ttc28Q80XJ3 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ttc28Q80XJ3 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC10.87□□□□□ -0.67
Ttc28Q80XJ3 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC10.87□□□□□ -0.67
Ttc28Q80XJ3 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC10.87□□□□□ -0.67
Ttc28Q80XJ3 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC10.87□□□□□ -0.67
Ttc28Q80XJ3 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Ttc28Q80XJ3 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC10.87□□□□□ -0.67
Ttc28Q80XJ3 Gm12380-201ENSMUST00000119012 544 ntBASIC10.87□□□□□ -0.67
Ttc28Q80XJ3 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC10.87□□□□□ -0.67
Ttc28Q80XJ3 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Ttc28Q80XJ3 Gm25517-201ENSMUST00000083865 134 ntBASIC10.87□□□□□ -0.67
Ttc28Q80XJ3 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ttc28Q80XJ3 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ttc28Q80XJ3 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ttc28Q80XJ3 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ttc28Q80XJ3 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ttc28Q80XJ3 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ttc28Q80XJ3 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ttc28Q80XJ3 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Ttc28Q80XJ3 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Ttc28Q80XJ3 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC10.87□□□□□ -0.67
Ttc28Q80XJ3 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ttc28Q80XJ3 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC10.87□□□□□ -0.67
Ttc28Q80XJ3 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ttc28Q80XJ3 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ttc28Q80XJ3 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC10.87□□□□□ -0.67
Ttc28Q80XJ3 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ttc28Q80XJ3 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ttc28Q80XJ3 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ttc28Q80XJ3 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ttc28Q80XJ3 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ttc28Q80XJ3 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ttc28Q80XJ3 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ttc28Q80XJ3 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms