Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim62Q80V85 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim62Q80V85 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Trim62Q80V85 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim62Q80V85 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim62Q80V85 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim62Q80V85 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim62Q80V85 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim62Q80V85 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim62Q80V85 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Trim62Q80V85 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim62Q80V85 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim62Q80V85 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trim62Q80V85 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim62Q80V85 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.46□□□□□ -0.25
Trim62Q80V85 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
Trim62Q80V85 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim62Q80V85 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim62Q80V85 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim62Q80V85 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trim62Q80V85 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trim62Q80V85 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trim62Q80V85 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim62Q80V85 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trim62Q80V85 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC13.46□□□□□ -0.25
Trim62Q80V85 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.46□□□□□ -0.25
Trim62Q80V85 Gm7029-201ENSMUST00000173226 450 ntBASIC13.46□□□□□ -0.25
Trim62Q80V85 AY702102-202ENSMUST00000194651 1173 ntBASIC13.46□□□□□ -0.25
Trim62Q80V85 Gm9728-201ENSMUST00000200197 1055 ntBASIC13.46□□□□□ -0.25
Trim62Q80V85 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.46□□□□□ -0.25
Trim62Q80V85 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim62Q80V85 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC13.46□□□□□ -0.25
Trim62Q80V85 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim62Q80V85 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Trim62Q80V85 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.46□□□□□ -0.25
Trim62Q80V85 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.46□□□□□ -0.25
Trim62Q80V85 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.46□□□□□ -0.25
Trim62Q80V85 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.46□□□□□ -0.25
Trim62Q80V85 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim62Q80V85 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim62Q80V85 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Trim62Q80V85 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim62Q80V85 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim62Q80V85 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim62Q80V85 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim62Q80V85 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim62Q80V85 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim62Q80V85 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim62Q80V85 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim62Q80V85 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim62Q80V85 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim62Q80V85 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim62Q80V85 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.45□□□□□ -0.26
Trim62Q80V85 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim62Q80V85 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim62Q80V85 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim62Q80V85 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim62Q80V85 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Trim62Q80V85 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim62Q80V85 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim62Q80V85 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim62Q80V85 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim62Q80V85 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim62Q80V85 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim62Q80V85 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trim62Q80V85 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.45□□□□□ -0.26
Trim62Q80V85 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim62Q80V85 Gm16379-201ENSMUST00000161469 348 ntBASIC13.45□□□□□ -0.26
Trim62Q80V85 Gm22121-201ENSMUST00000175148 54 ntBASIC13.45□□□□□ -0.26
Trim62Q80V85 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.45□□□□□ -0.26
Trim62Q80V85 Gm8762-201ENSMUST00000193486 339 ntBASIC13.45□□□□□ -0.26
Trim62Q80V85 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.45□□□□□ -0.26
Trim62Q80V85 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim62Q80V85 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim62Q80V85 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim62Q80V85 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trim62Q80V85 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim62Q80V85 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim62Q80V85 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim62Q80V85 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim62Q80V85 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim62Q80V85 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Trim62Q80V85 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim62Q80V85 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim62Q80V85 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim62Q80V85 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trim62Q80V85 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim62Q80V85 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trim62Q80V85 Matn2-206ENSMUST00000228570 2798 ntBASIC13.44□□□□□ -0.26
Trim62Q80V85 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim62Q80V85 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim62Q80V85 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim62Q80V85 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.44□□□□□ -0.26
Trim62Q80V85 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.44□□□□□ -0.26
Trim62Q80V85 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim62Q80V85 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim62Q80V85 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.44□□□□□ -0.26
Trim62Q80V85 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim62Q80V85 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim62Q80V85 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms