Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh19Q80TF3 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh19Q80TF3 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh19Q80TF3 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.79□□□□□ -0.36
Pcdh19Q80TF3 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh19Q80TF3 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh19Q80TF3 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh19Q80TF3 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.79□□□□□ -0.36
Pcdh19Q80TF3 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh19Q80TF3 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh19Q80TF3 Gm6023-201ENSMUST00000118217 606 ntBASIC12.79□□□□□ -0.36
Pcdh19Q80TF3 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh19Q80TF3 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.79□□□□□ -0.36
Pcdh19Q80TF3 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.79□□□□□ -0.36
Pcdh19Q80TF3 Gm17208-201ENSMUST00000168388 535 ntBASIC12.79□□□□□ -0.36
Pcdh19Q80TF3 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh19Q80TF3 Mir6420-201ENSMUST00000185032 102 ntBASIC12.79□□□□□ -0.36
Pcdh19Q80TF3 Gm38266-201ENSMUST00000194931 421 ntBASIC12.79□□□□□ -0.36
Pcdh19Q80TF3 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.79□□□□□ -0.36
Pcdh19Q80TF3 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh19Q80TF3 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.79□□□□□ -0.36
Pcdh19Q80TF3 Acot6-202ENSMUST00000222921 3622 ntBASIC12.79□□□□□ -0.36
Pcdh19Q80TF3 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh19Q80TF3 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh19Q80TF3 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh19Q80TF3 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh19Q80TF3 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh19Q80TF3 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh19Q80TF3 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.79□□□□□ -0.36
Pcdh19Q80TF3 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Pcdh19Q80TF3 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh19Q80TF3 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Pcdh19Q80TF3 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.79□□□□□ -0.36
Pcdh19Q80TF3 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh19Q80TF3 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Pcdh19Q80TF3 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh19Q80TF3 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh19Q80TF3 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Pcdh19Q80TF3 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh19Q80TF3 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Pcdh19Q80TF3 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh19Q80TF3 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh19Q80TF3 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh19Q80TF3 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh19Q80TF3 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh19Q80TF3 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh19Q80TF3 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh19Q80TF3 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.78□□□□□ -0.36
Pcdh19Q80TF3 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.78□□□□□ -0.36
Pcdh19Q80TF3 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.78□□□□□ -0.36
Pcdh19Q80TF3 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh19Q80TF3 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.78□□□□□ -0.36
Pcdh19Q80TF3 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh19Q80TF3 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.78□□□□□ -0.36
Pcdh19Q80TF3 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.78□□□□□ -0.36
Pcdh19Q80TF3 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh19Q80TF3 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh19Q80TF3 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh19Q80TF3 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh19Q80TF3 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh19Q80TF3 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Pcdh19Q80TF3 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh19Q80TF3 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh19Q80TF3 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh19Q80TF3 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh19Q80TF3 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh19Q80TF3 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh19Q80TF3 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh19Q80TF3 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh19Q80TF3 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Pcdh19Q80TF3 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Pcdh19Q80TF3 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Pcdh19Q80TF3 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdh19Q80TF3 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdh19Q80TF3 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh19Q80TF3 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
Pcdh19Q80TF3 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Pcdh19Q80TF3 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh19Q80TF3 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.77□□□□□ -0.37
Pcdh19Q80TF3 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.77□□□□□ -0.37
Pcdh19Q80TF3 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.77□□□□□ -0.37
Pcdh19Q80TF3 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.77□□□□□ -0.37
Pcdh19Q80TF3 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.77□□□□□ -0.37
Pcdh19Q80TF3 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.77□□□□□ -0.37
Pcdh19Q80TF3 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.77□□□□□ -0.37
Pcdh19Q80TF3 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.77□□□□□ -0.37
Pcdh19Q80TF3 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.77□□□□□ -0.37
Pcdh19Q80TF3 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.77□□□□□ -0.37
Pcdh19Q80TF3 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.77□□□□□ -0.37
Pcdh19Q80TF3 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh19Q80TF3 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh19Q80TF3 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh19Q80TF3 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh19Q80TF3 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh19Q80TF3 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh19Q80TF3 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh19Q80TF3 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh19Q80TF3 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh19Q80TF3 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
Pcdh19Q80TF3 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms