Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.09□□□□□ -0.47
Pif1Q80SX8 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.09□□□□□ -0.47
Pif1Q80SX8 Gm8227-201ENSMUST00000223306 571 ntBASIC12.09□□□□□ -0.47
Pif1Q80SX8 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pif1Q80SX8 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pif1Q80SX8 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pif1Q80SX8 Gm10686-201ENSMUST00000215389 3247 ntBASIC12.09□□□□□ -0.47
Pif1Q80SX8 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Pif1Q80SX8 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pif1Q80SX8 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pif1Q80SX8 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pif1Q80SX8 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pif1Q80SX8 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.09□□□□□ -0.47
Pif1Q80SX8 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.09□□□□□ -0.47
Pif1Q80SX8 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.09□□□□□ -0.47
Pif1Q80SX8 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pif1Q80SX8 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pif1Q80SX8 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pif1Q80SX8 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.09□□□□□ -0.47
Pif1Q80SX8 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Pif1Q80SX8 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.09□□□□□ -0.47
Pif1Q80SX8 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.09□□□□□ -0.47
Pif1Q80SX8 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pif1Q80SX8 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pif1Q80SX8 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pif1Q80SX8 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.09□□□□□ -0.47
Pif1Q80SX8 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pif1Q80SX8 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.08□□□□□ -0.47
Pif1Q80SX8 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Pif1Q80SX8 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Pif1Q80SX8 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pif1Q80SX8 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pif1Q80SX8 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pif1Q80SX8 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.08□□□□□ -0.48
Pif1Q80SX8 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Pif1Q80SX8 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pif1Q80SX8 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pif1Q80SX8 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pif1Q80SX8 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.08□□□□□ -0.48
Pif1Q80SX8 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pif1Q80SX8 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pif1Q80SX8 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pif1Q80SX8 Gm14716-201ENSMUST00000120138 718 ntBASIC12.08□□□□□ -0.48
Pif1Q80SX8 Gm13297-201ENSMUST00000120205 934 ntBASIC12.08□□□□□ -0.48
Pif1Q80SX8 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.08□□□□□ -0.48
Pif1Q80SX8 Gm14381-201ENSMUST00000122105 414 ntBASIC12.08□□□□□ -0.48
Pif1Q80SX8 Gm7809-201ENSMUST00000153199 742 ntBASIC12.08□□□□□ -0.48
Pif1Q80SX8 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pif1Q80SX8 Mir3102-201ENSMUST00000175555 104 ntBASIC12.08□□□□□ -0.48
Pif1Q80SX8 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.08□□□□□ -0.48
Pif1Q80SX8 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.08□□□□□ -0.48
Pif1Q80SX8 Gm29199-201ENSMUST00000187766 775 ntBASIC12.08□□□□□ -0.48
Pif1Q80SX8 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.08□□□□□ -0.48
Pif1Q80SX8 Gm38158-201ENSMUST00000194617 339 ntBASIC12.08□□□□□ -0.48
Pif1Q80SX8 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.08□□□□□ -0.48
Pif1Q80SX8 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Pif1Q80SX8 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.08□□□□□ -0.48
Pif1Q80SX8 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.08□□□□□ -0.48
Pif1Q80SX8 Gm19163-201ENSMUST00000223313 780 ntBASIC12.08□□□□□ -0.48
Pif1Q80SX8 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.08□□□□□ -0.48
Pif1Q80SX8 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.08□□□□□ -0.48
Pif1Q80SX8 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pif1Q80SX8 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pif1Q80SX8 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pif1Q80SX8 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.08□□□□□ -0.48
Pif1Q80SX8 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.08□□□□□ -0.48
Pif1Q80SX8 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pif1Q80SX8 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Pif1Q80SX8 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pif1Q80SX8 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Pif1Q80SX8 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.08□□□□□ -0.48
Pif1Q80SX8 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Pif1Q80SX8 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Pif1Q80SX8 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pif1Q80SX8 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pif1Q80SX8 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pif1Q80SX8 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Pif1Q80SX8 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pif1Q80SX8 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.08□□□□□ -0.48
Pif1Q80SX8 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Pif1Q80SX8 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pif1Q80SX8 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Pif1Q80SX8 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pif1Q80SX8 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Pif1Q80SX8 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pif1Q80SX8 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pif1Q80SX8 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.07□□□□□ -0.48
Pif1Q80SX8 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pif1Q80SX8 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pif1Q80SX8 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pif1Q80SX8 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Pif1Q80SX8 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pif1Q80SX8 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pif1Q80SX8 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pif1Q80SX8 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pif1Q80SX8 Gm11637-201ENSMUST00000120601 592 ntBASIC12.07□□□□□ -0.48
Pif1Q80SX8 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.07□□□□□ -0.48
Pif1Q80SX8 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.07□□□□□ -0.48
Pif1Q80SX8 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.07□□□□□ -0.48
Pif1Q80SX8 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms