Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chd4Q6PDQ2 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Chd4Q6PDQ2 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chd4Q6PDQ2 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chd4Q6PDQ2 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chd4Q6PDQ2 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chd4Q6PDQ2 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chd4Q6PDQ2 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chd4Q6PDQ2 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chd4Q6PDQ2 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC16.67■□□□□ 0.26
Chd4Q6PDQ2 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chd4Q6PDQ2 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Chd4Q6PDQ2 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chd4Q6PDQ2 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
Chd4Q6PDQ2 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
Chd4Q6PDQ2 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC16.67■□□□□ 0.26
Chd4Q6PDQ2 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chd4Q6PDQ2 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chd4Q6PDQ2 Gm44065-201ENSMUST00000203184 3527 ntBASIC16.67■□□□□ 0.26
Chd4Q6PDQ2 Gm24231-201ENSMUST00000104315 133 ntBASIC16.67■□□□□ 0.26
Chd4Q6PDQ2 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Chd4Q6PDQ2 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC16.67■□□□□ 0.26
Chd4Q6PDQ2 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chd4Q6PDQ2 CT009718.3-201ENSMUST00000221116 367 ntBASIC16.67■□□□□ 0.26
Chd4Q6PDQ2 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chd4Q6PDQ2 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chd4Q6PDQ2 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chd4Q6PDQ2 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Chd4Q6PDQ2 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC16.67■□□□□ 0.26
Chd4Q6PDQ2 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Chd4Q6PDQ2 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Chd4Q6PDQ2 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC16.67■□□□□ 0.26
Chd4Q6PDQ2 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC16.67■□□□□ 0.26
Chd4Q6PDQ2 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Chd4Q6PDQ2 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Chd4Q6PDQ2 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chd4Q6PDQ2 n-R5s14-201ENSMUST00000122688 107 ntBASIC16.66■□□□□ 0.26
Chd4Q6PDQ2 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC16.66■□□□□ 0.26
Chd4Q6PDQ2 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC16.66■□□□□ 0.26
Chd4Q6PDQ2 Gm19187-201ENSMUST00000206781 892 ntBASIC16.66■□□□□ 0.26
Chd4Q6PDQ2 Gm45770-201ENSMUST00000212105 616 ntBASIC16.66■□□□□ 0.26
Chd4Q6PDQ2 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Chd4Q6PDQ2 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chd4Q6PDQ2 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC16.66■□□□□ 0.26
Chd4Q6PDQ2 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chd4Q6PDQ2 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Chd4Q6PDQ2 Matn2-206ENSMUST00000228570 2798 ntBASIC16.66■□□□□ 0.26
Chd4Q6PDQ2 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chd4Q6PDQ2 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chd4Q6PDQ2 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chd4Q6PDQ2 Gm45706-201ENSMUST00000213063 2136 ntBASIC16.66■□□□□ 0.26
Chd4Q6PDQ2 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chd4Q6PDQ2 Gm5638-201ENSMUST00000118618 1258 ntBASIC16.66■□□□□ 0.26
Chd4Q6PDQ2 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Chd4Q6PDQ2 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Chd4Q6PDQ2 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC16.66■□□□□ 0.26
Chd4Q6PDQ2 Gm9022-201ENSMUST00000182482 992 ntBASIC16.66■□□□□ 0.26
Chd4Q6PDQ2 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
Chd4Q6PDQ2 Gm44136-201ENSMUST00000203819 1106 ntBASIC16.66■□□□□ 0.26
Chd4Q6PDQ2 AC093022.5-201ENSMUST00000226841 1079 ntBASIC16.66■□□□□ 0.26
Chd4Q6PDQ2 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chd4Q6PDQ2 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Chd4Q6PDQ2 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Chd4Q6PDQ2 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chd4Q6PDQ2 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Chd4Q6PDQ2 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Chd4Q6PDQ2 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Chd4Q6PDQ2 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chd4Q6PDQ2 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chd4Q6PDQ2 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Chd4Q6PDQ2 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chd4Q6PDQ2 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chd4Q6PDQ2 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chd4Q6PDQ2 AC159308.2-201ENSMUST00000213592 2325 ntBASIC16.65■□□□□ 0.26
Chd4Q6PDQ2 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Chd4Q6PDQ2 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC16.65■□□□□ 0.26
Chd4Q6PDQ2 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Chd4Q6PDQ2 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chd4Q6PDQ2 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Chd4Q6PDQ2 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Chd4Q6PDQ2 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Chd4Q6PDQ2 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chd4Q6PDQ2 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chd4Q6PDQ2 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Chd4Q6PDQ2 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Chd4Q6PDQ2 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chd4Q6PDQ2 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chd4Q6PDQ2 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chd4Q6PDQ2 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chd4Q6PDQ2 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Chd4Q6PDQ2 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chd4Q6PDQ2 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chd4Q6PDQ2 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chd4Q6PDQ2 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC16.65■□□□□ 0.26
Chd4Q6PDQ2 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Chd4Q6PDQ2 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Chd4Q6PDQ2 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Chd4Q6PDQ2 Gm37986-201ENSMUST00000193285 383 ntBASIC16.64■□□□□ 0.26
Chd4Q6PDQ2 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC16.64■□□□□ 0.26
Chd4Q6PDQ2 Gm43378-201ENSMUST00000199336 582 ntBASIC16.64■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms