Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.78□□□□□ -0.2
Scube3Q66PY1 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scube3Q66PY1 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.78□□□□□ -0.2
Scube3Q66PY1 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Scube3Q66PY1 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Scube3Q66PY1 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Scube3Q66PY1 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Scube3Q66PY1 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Scube3Q66PY1 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scube3Q66PY1 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.77□□□□□ -0.21
Scube3Q66PY1 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Scube3Q66PY1 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.77□□□□□ -0.21
Scube3Q66PY1 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.77□□□□□ -0.21
Scube3Q66PY1 Gm12702-201ENSMUST00000123258 612 ntTSL 3 BASIC13.77□□□□□ -0.21
Scube3Q66PY1 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scube3Q66PY1 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scube3Q66PY1 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scube3Q66PY1 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.77□□□□□ -0.21
Scube3Q66PY1 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC13.77□□□□□ -0.21
Scube3Q66PY1 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Scube3Q66PY1 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.77□□□□□ -0.21
Scube3Q66PY1 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.77□□□□□ -0.21
Scube3Q66PY1 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.77□□□□□ -0.21
Scube3Q66PY1 Gm45610-201ENSMUST00000209227 784 ntBASIC13.77□□□□□ -0.21
Scube3Q66PY1 Gm6458-201ENSMUST00000211573 635 ntBASIC13.77□□□□□ -0.21
Scube3Q66PY1 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.77□□□□□ -0.21
Scube3Q66PY1 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Scube3Q66PY1 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scube3Q66PY1 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scube3Q66PY1 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scube3Q66PY1 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scube3Q66PY1 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scube3Q66PY1 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scube3Q66PY1 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Scube3Q66PY1 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scube3Q66PY1 Gm26226-201ENSMUST00000082509 116 ntBASIC13.77□□□□□ -0.21
Scube3Q66PY1 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Scube3Q66PY1 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scube3Q66PY1 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scube3Q66PY1 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Scube3Q66PY1 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scube3Q66PY1 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scube3Q66PY1 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scube3Q66PY1 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Scube3Q66PY1 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Scube3Q66PY1 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Scube3Q66PY1 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scube3Q66PY1 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scube3Q66PY1 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.76□□□□□ -0.21
Scube3Q66PY1 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scube3Q66PY1 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Scube3Q66PY1 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Scube3Q66PY1 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Scube3Q66PY1 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Scube3Q66PY1 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scube3Q66PY1 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Scube3Q66PY1 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scube3Q66PY1 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Scube3Q66PY1 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Scube3Q66PY1 Gm22709-201ENSMUST00000116893 111 ntBASIC13.76□□□□□ -0.21
Scube3Q66PY1 Gm649-201ENSMUST00000117284 1054 ntBASIC13.76□□□□□ -0.21
Scube3Q66PY1 Gm13226-201ENSMUST00000117838 404 ntBASIC13.76□□□□□ -0.21
Scube3Q66PY1 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC13.76□□□□□ -0.21
Scube3Q66PY1 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Scube3Q66PY1 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC13.76□□□□□ -0.21
Scube3Q66PY1 Gm19931-201ENSMUST00000198920 368 ntBASIC13.76□□□□□ -0.21
Scube3Q66PY1 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Scube3Q66PY1 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scube3Q66PY1 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scube3Q66PY1 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Scube3Q66PY1 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scube3Q66PY1 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scube3Q66PY1 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scube3Q66PY1 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Scube3Q66PY1 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scube3Q66PY1 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scube3Q66PY1 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Scube3Q66PY1 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scube3Q66PY1 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Scube3Q66PY1 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scube3Q66PY1 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.76□□□□□ -0.21
Scube3Q66PY1 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Scube3Q66PY1 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
Scube3Q66PY1 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scube3Q66PY1 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scube3Q66PY1 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scube3Q66PY1 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Scube3Q66PY1 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scube3Q66PY1 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.75□□□□□ -0.21
Scube3Q66PY1 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scube3Q66PY1 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.75□□□□□ -0.21
Scube3Q66PY1 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scube3Q66PY1 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scube3Q66PY1 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Scube3Q66PY1 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Scube3Q66PY1 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scube3Q66PY1 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Scube3Q66PY1 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Scube3Q66PY1 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scube3Q66PY1 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms