Protein–RNA interactions for Protein: Q64729

Tgfbr1, TGF-beta receptor type-1, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr1Q64729 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tgfbr1Q64729 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tgfbr1Q64729 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tgfbr1Q64729 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tgfbr1Q64729 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Tgfbr1Q64729 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
Tgfbr1Q64729 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tgfbr1Q64729 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tgfbr1Q64729 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tgfbr1Q64729 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tgfbr1Q64729 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Tgfbr1Q64729 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tgfbr1Q64729 Gm43321-201ENSMUST00000198897 2409 ntBASIC10.66□□□□□ -0.7
Tgfbr1Q64729 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tgfbr1Q64729 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tgfbr1Q64729 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC10.66□□□□□ -0.7
Tgfbr1Q64729 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Tgfbr1Q64729 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tgfbr1Q64729 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tgfbr1Q64729 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC10.66□□□□□ -0.7
Tgfbr1Q64729 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Tgfbr1Q64729 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC10.66□□□□□ -0.7
Tgfbr1Q64729 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tgfbr1Q64729 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Tgfbr1Q64729 Gm4875-201ENSMUST00000118257 786 ntBASIC10.66□□□□□ -0.7
Tgfbr1Q64729 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Tgfbr1Q64729 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Tgfbr1Q64729 Gm26308-201ENSMUST00000157768 69 ntBASIC10.66□□□□□ -0.7
Tgfbr1Q64729 Gm6736-201ENSMUST00000166583 948 ntBASIC10.66□□□□□ -0.7
Tgfbr1Q64729 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC10.66□□□□□ -0.7
Tgfbr1Q64729 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tgfbr1Q64729 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC10.66□□□□□ -0.7
Tgfbr1Q64729 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tgfbr1Q64729 Gm8396-201ENSMUST00000057361 823 ntBASIC10.66□□□□□ -0.7
Tgfbr1Q64729 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tgfbr1Q64729 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tgfbr1Q64729 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tgfbr1Q64729 Zfp125-201ENSMUST00000079237 2488 ntBASIC10.66□□□□□ -0.7
Tgfbr1Q64729 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tgfbr1Q64729 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tgfbr1Q64729 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tgfbr1Q64729 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tgfbr1Q64729 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tgfbr1Q64729 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Tgfbr1Q64729 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tgfbr1Q64729 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tgfbr1Q64729 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tgfbr1Q64729 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tgfbr1Q64729 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Tgfbr1Q64729 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Tgfbr1Q64729 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tgfbr1Q64729 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Tgfbr1Q64729 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Tgfbr1Q64729 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Tgfbr1Q64729 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Tgfbr1Q64729 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Tgfbr1Q64729 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC10.65□□□□□ -0.7
Tgfbr1Q64729 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC10.65□□□□□ -0.7
Tgfbr1Q64729 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC10.65□□□□□ -0.7
Tgfbr1Q64729 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC10.65□□□□□ -0.7
Tgfbr1Q64729 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Tgfbr1Q64729 Gm17435-202ENSMUST00000212699 1998 ntBASIC10.65□□□□□ -0.7
Tgfbr1Q64729 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC10.65□□□□□ -0.7
Tgfbr1Q64729 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Tgfbr1Q64729 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Tgfbr1Q64729 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.7
Tgfbr1Q64729 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Tgfbr1Q64729 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Tgfbr1Q64729 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Tgfbr1Q64729 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Tgfbr1Q64729 Gm4204-201ENSMUST00000110798 1231 ntBASIC10.65□□□□□ -0.7
Tgfbr1Q64729 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Tgfbr1Q64729 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC10.65□□□□□ -0.7
Tgfbr1Q64729 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Tgfbr1Q64729 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.7
Tgfbr1Q64729 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Tgfbr1Q64729 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Tgfbr1Q64729 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC10.65□□□□□ -0.7
Tgfbr1Q64729 Gm27321-201ENSMUST00000185021 205 ntBASIC10.65□□□□□ -0.7
Tgfbr1Q64729 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Tgfbr1Q64729 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC10.65□□□□□ -0.7
Tgfbr1Q64729 Gm45841-201ENSMUST00000207700 164 ntBASIC10.65□□□□□ -0.7
Tgfbr1Q64729 Gm17795-201ENSMUST00000214505 757 ntBASIC10.65□□□□□ -0.7
Tgfbr1Q64729 CT025678.1-201ENSMUST00000214795 2972 ntBASIC10.65□□□□□ -0.7
Tgfbr1Q64729 AC124732.2-201ENSMUST00000221977 316 ntBASIC10.65□□□□□ -0.7
Tgfbr1Q64729 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Tgfbr1Q64729 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Tgfbr1Q64729 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Tgfbr1Q64729 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC10.65□□□□□ -0.7
Tgfbr1Q64729 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Tgfbr1Q64729 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Tgfbr1Q64729 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Tgfbr1Q64729 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Tgfbr1Q64729 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC10.65□□□□□ -0.7
Tgfbr1Q64729 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Tgfbr1Q64729 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Tgfbr1Q64729 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC10.65□□□□□ -0.7
Tgfbr1Q64729 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Tgfbr1Q64729 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Tgfbr1Q64729 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms