Protein–RNA interactions for Protein: Q62249

Sox19, Protein SOX-19 (Fragment), mousemouse

Predictions only

Length 55 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox19Q62249 Gm12671-201ENSMUST00000119978 1002 ntBASIC11.1□□□□□ -0.63
Sox19Q62249 Gm13292-201ENSMUST00000120014 1000 ntBASIC11.1□□□□□ -0.63
Sox19Q62249 Gm12403-201ENSMUST00000121384 959 ntBASIC11.1□□□□□ -0.63
Sox19Q62249 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
Sox19Q62249 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox19Q62249 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC11.1□□□□□ -0.63
Sox19Q62249 Gm25144-201ENSMUST00000179561 110 ntBASIC11.1□□□□□ -0.63
Sox19Q62249 Gm25352-201ENSMUST00000179815 110 ntBASIC11.1□□□□□ -0.63
Sox19Q62249 Gm10359-201ENSMUST00000180167 1002 ntBASIC11.1□□□□□ -0.63
Sox19Q62249 Gm12033-201ENSMUST00000180654 1002 ntBASIC11.1□□□□□ -0.63
Sox19Q62249 Gm5559-201ENSMUST00000180755 1002 ntBASIC11.1□□□□□ -0.63
Sox19Q62249 Gm4335-201ENSMUST00000182581 1004 ntBASIC11.1□□□□□ -0.63
Sox19Q62249 Gm27622-201ENSMUST00000183779 60 ntBASIC11.1□□□□□ -0.63
Sox19Q62249 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Sox19Q62249 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC11.1□□□□□ -0.63
Sox19Q62249 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.1□□□□□ -0.63
Sox19Q62249 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.1□□□□□ -0.63
Sox19Q62249 AC154276.1-201ENSMUST00000228874 1299 ntBASIC11.1□□□□□ -0.63
Sox19Q62249 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox19Q62249 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Sox19Q62249 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox19Q62249 Gm24447-201ENSMUST00000083977 338 ntBASIC11.1□□□□□ -0.63
Sox19Q62249 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox19Q62249 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Sox19Q62249 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Sox19Q62249 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox19Q62249 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sox19Q62249 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox19Q62249 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox19Q62249 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sox19Q62249 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
Sox19Q62249 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Sox19Q62249 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox19Q62249 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox19Q62249 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox19Q62249 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox19Q62249 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox19Q62249 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sox19Q62249 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.1□□□□□ -0.63
Sox19Q62249 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox19Q62249 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Sox19Q62249 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Sox19Q62249 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox19Q62249 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox19Q62249 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sox19Q62249 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sox19Q62249 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox19Q62249 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Sox19Q62249 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox19Q62249 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.09□□□□□ -0.63
Sox19Q62249 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sox19Q62249 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox19Q62249 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Sox19Q62249 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Sox19Q62249 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Sox19Q62249 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sox19Q62249 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sox19Q62249 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Sox19Q62249 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Sox19Q62249 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox19Q62249 Gm6415-201ENSMUST00000118488 348 ntBASIC11.09□□□□□ -0.63
Sox19Q62249 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.09□□□□□ -0.63
Sox19Q62249 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sox19Q62249 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC11.09□□□□□ -0.63
Sox19Q62249 Gm27533-201ENSMUST00000183800 152 ntBASIC11.09□□□□□ -0.63
Sox19Q62249 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC11.09□□□□□ -0.63
Sox19Q62249 Gm43474-201ENSMUST00000196415 774 ntBASIC11.09□□□□□ -0.63
Sox19Q62249 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox19Q62249 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sox19Q62249 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Sox19Q62249 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC11.09□□□□□ -0.63
Sox19Q62249 Gm17870-201ENSMUST00000219489 1174 ntBASIC11.09□□□□□ -0.63
Sox19Q62249 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox19Q62249 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Sox19Q62249 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox19Q62249 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox19Q62249 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Sox19Q62249 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox19Q62249 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Sox19Q62249 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox19Q62249 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox19Q62249 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.09□□□□□ -0.63
Sox19Q62249 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox19Q62249 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox19Q62249 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sox19Q62249 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Sox19Q62249 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox19Q62249 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox19Q62249 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sox19Q62249 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox19Q62249 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox19Q62249 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox19Q62249 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox19Q62249 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Sox19Q62249 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox19Q62249 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Sox19Q62249 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.63
Sox19Q62249 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sox19Q62249 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sox19Q62249 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms