Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC10.95□□□□□ -0.66
SspnQ62147 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SspnQ62147 AC155258.1-201ENSMUST00000219303 253 ntBASIC10.95□□□□□ -0.66
SspnQ62147 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SspnQ62147 Gm24447-201ENSMUST00000083977 338 ntBASIC10.95□□□□□ -0.66
SspnQ62147 Hist1h2al-201ENSMUST00000091708 339 ntBASIC10.95□□□□□ -0.66
SspnQ62147 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
SspnQ62147 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SspnQ62147 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
SspnQ62147 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC10.95□□□□□ -0.66
SspnQ62147 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SspnQ62147 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SspnQ62147 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
SspnQ62147 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SspnQ62147 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SspnQ62147 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SspnQ62147 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SspnQ62147 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SspnQ62147 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
SspnQ62147 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
SspnQ62147 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
SspnQ62147 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SspnQ62147 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SspnQ62147 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC10.95□□□□□ -0.66
SspnQ62147 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SspnQ62147 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SspnQ62147 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
SspnQ62147 Gm5989-201ENSMUST00000096092 2077 ntBASIC10.94□□□□□ -0.66
SspnQ62147 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
SspnQ62147 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
SspnQ62147 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
SspnQ62147 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
SspnQ62147 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SspnQ62147 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SspnQ62147 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SspnQ62147 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC10.94□□□□□ -0.66
SspnQ62147 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SspnQ62147 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC10.94□□□□□ -0.66
SspnQ62147 Gm15321-201ENSMUST00000121290 288 ntBASIC10.94□□□□□ -0.66
SspnQ62147 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SspnQ62147 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SspnQ62147 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC10.94□□□□□ -0.66
SspnQ62147 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
SspnQ62147 Gm26464-201ENSMUST00000157094 305 ntBASIC10.94□□□□□ -0.66
SspnQ62147 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC10.94□□□□□ -0.66
SspnQ62147 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SspnQ62147 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SspnQ62147 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SspnQ62147 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC10.94□□□□□ -0.66
SspnQ62147 Gm45195-201ENSMUST00000205597 1008 ntBASIC10.94□□□□□ -0.66
SspnQ62147 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
SspnQ62147 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SspnQ62147 AC124732.1-201ENSMUST00000221551 910 ntBASIC10.94□□□□□ -0.66
SspnQ62147 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SspnQ62147 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC10.94□□□□□ -0.66
SspnQ62147 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC10.94□□□□□ -0.66
SspnQ62147 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SspnQ62147 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
SspnQ62147 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SspnQ62147 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SspnQ62147 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
SspnQ62147 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
SspnQ62147 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
SspnQ62147 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SspnQ62147 Gm3365-201ENSMUST00000216296 1480 ntBASIC10.93□□□□□ -0.66
SspnQ62147 Ldb3-207ENSMUST00000227819 1499 ntBASIC10.93□□□□□ -0.66
SspnQ62147 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SspnQ62147 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SspnQ62147 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SspnQ62147 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
SspnQ62147 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SspnQ62147 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
SspnQ62147 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
SspnQ62147 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SspnQ62147 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
SspnQ62147 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC10.93□□□□□ -0.66
SspnQ62147 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SspnQ62147 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.66
SspnQ62147 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SspnQ62147 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SspnQ62147 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SspnQ62147 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SspnQ62147 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
SspnQ62147 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
SspnQ62147 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SspnQ62147 Gm12416-201ENSMUST00000120911 1008 ntBASIC10.93□□□□□ -0.66
SspnQ62147 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC10.93□□□□□ -0.66
SspnQ62147 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC10.93□□□□□ -0.66
SspnQ62147 Gm38144-201ENSMUST00000192790 465 ntBASIC10.93□□□□□ -0.66
SspnQ62147 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC10.93□□□□□ -0.66
SspnQ62147 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
SspnQ62147 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SspnQ62147 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SspnQ62147 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
SspnQ62147 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SspnQ62147 Adra1a-206ENSMUST00000225182 2337 ntBASIC10.93□□□□□ -0.66
SspnQ62147 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SspnQ62147 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
SspnQ62147 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC10.93□□□□□ -0.66
SspnQ62147 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms