Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.71□□□□□ -0.37
Vsx2Q61412 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vsx2Q61412 Gm18473-201ENSMUST00000220543 868 ntBASIC12.71□□□□□ -0.37
Vsx2Q61412 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vsx2Q61412 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vsx2Q61412 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.71□□□□□ -0.37
Vsx2Q61412 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vsx2Q61412 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vsx2Q61412 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.71□□□□□ -0.37
Vsx2Q61412 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Vsx2Q61412 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vsx2Q61412 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Vsx2Q61412 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Vsx2Q61412 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Vsx2Q61412 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Vsx2Q61412 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Vsx2Q61412 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Vsx2Q61412 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Vsx2Q61412 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Vsx2Q61412 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Vsx2Q61412 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Vsx2Q61412 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Vsx2Q61412 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Vsx2Q61412 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Vsx2Q61412 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Vsx2Q61412 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.71□□□□□ -0.38
Vsx2Q61412 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vsx2Q61412 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vsx2Q61412 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Vsx2Q61412 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vsx2Q61412 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vsx2Q61412 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Vsx2Q61412 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vsx2Q61412 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Vsx2Q61412 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vsx2Q61412 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Vsx2Q61412 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vsx2Q61412 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.7□□□□□ -0.38
Vsx2Q61412 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vsx2Q61412 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Vsx2Q61412 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.7□□□□□ -0.38
Vsx2Q61412 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.7□□□□□ -0.38
Vsx2Q61412 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.7□□□□□ -0.38
Vsx2Q61412 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.7□□□□□ -0.38
Vsx2Q61412 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Vsx2Q61412 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vsx2Q61412 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.7□□□□□ -0.38
Vsx2Q61412 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.7□□□□□ -0.38
Vsx2Q61412 Gm43433-201ENSMUST00000196573 481 ntBASIC12.7□□□□□ -0.38
Vsx2Q61412 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.7□□□□□ -0.38
Vsx2Q61412 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vsx2Q61412 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Vsx2Q61412 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Vsx2Q61412 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.7□□□□□ -0.38
Vsx2Q61412 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Vsx2Q61412 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Vsx2Q61412 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vsx2Q61412 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Vsx2Q61412 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
Vsx2Q61412 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.7□□□□□ -0.38
Vsx2Q61412 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.7□□□□□ -0.38
Vsx2Q61412 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vsx2Q61412 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vsx2Q61412 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vsx2Q61412 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Vsx2Q61412 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vsx2Q61412 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vsx2Q61412 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vsx2Q61412 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vsx2Q61412 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vsx2Q61412 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vsx2Q61412 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vsx2Q61412 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vsx2Q61412 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.69□□□□□ -0.38
Vsx2Q61412 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Vsx2Q61412 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Vsx2Q61412 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Vsx2Q61412 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vsx2Q61412 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vsx2Q61412 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vsx2Q61412 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Vsx2Q61412 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vsx2Q61412 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.69□□□□□ -0.38
Vsx2Q61412 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Vsx2Q61412 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.69□□□□□ -0.38
Vsx2Q61412 Gm17150-201ENSMUST00000165577 381 ntBASIC12.69□□□□□ -0.38
Vsx2Q61412 Gm8652-201ENSMUST00000181363 964 ntBASIC12.69□□□□□ -0.38
Vsx2Q61412 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vsx2Q61412 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vsx2Q61412 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Vsx2Q61412 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Vsx2Q61412 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vsx2Q61412 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vsx2Q61412 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Vsx2Q61412 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vsx2Q61412 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vsx2Q61412 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vsx2Q61412 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Vsx2Q61412 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vsx2Q61412 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms