Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfaip3Q60769 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfaip3Q60769 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfaip3Q60769 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.29□□□□□ -0.44
Tnfaip3Q60769 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfaip3Q60769 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfaip3Q60769 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfaip3Q60769 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfaip3Q60769 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfaip3Q60769 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.29□□□□□ -0.44
Tnfaip3Q60769 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfaip3Q60769 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfaip3Q60769 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfaip3Q60769 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfaip3Q60769 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfaip3Q60769 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfaip3Q60769 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfaip3Q60769 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfaip3Q60769 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfaip3Q60769 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfaip3Q60769 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfaip3Q60769 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.28□□□□□ -0.44
Tnfaip3Q60769 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfaip3Q60769 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfaip3Q60769 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfaip3Q60769 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.28□□□□□ -0.44
Tnfaip3Q60769 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfaip3Q60769 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Tnfaip3Q60769 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Tnfaip3Q60769 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfaip3Q60769 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.28□□□□□ -0.44
Tnfaip3Q60769 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.28□□□□□ -0.44
Tnfaip3Q60769 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfaip3Q60769 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Tnfaip3Q60769 Gm28693-202ENSMUST00000190758 331 ntBASIC12.28□□□□□ -0.44
Tnfaip3Q60769 Gm37424-201ENSMUST00000191727 561 ntBASIC12.28□□□□□ -0.44
Tnfaip3Q60769 Gm6458-201ENSMUST00000211573 635 ntBASIC12.28□□□□□ -0.44
Tnfaip3Q60769 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfaip3Q60769 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Tnfaip3Q60769 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfaip3Q60769 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfaip3Q60769 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfaip3Q60769 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfaip3Q60769 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfaip3Q60769 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.28□□□□□ -0.44
Tnfaip3Q60769 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfaip3Q60769 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfaip3Q60769 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.28□□□□□ -0.44
Tnfaip3Q60769 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tnfaip3Q60769 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Tnfaip3Q60769 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Tnfaip3Q60769 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tnfaip3Q60769 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Tnfaip3Q60769 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Tnfaip3Q60769 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tnfaip3Q60769 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfaip3Q60769 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfaip3Q60769 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfaip3Q60769 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.27□□□□□ -0.45
Tnfaip3Q60769 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfaip3Q60769 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Tnfaip3Q60769 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Tnfaip3Q60769 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfaip3Q60769 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfaip3Q60769 Gm5370-201ENSMUST00000187187 574 ntBASIC12.27□□□□□ -0.45
Tnfaip3Q60769 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.27□□□□□ -0.45
Tnfaip3Q60769 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfaip3Q60769 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfaip3Q60769 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Tnfaip3Q60769 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfaip3Q60769 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.27□□□□□ -0.45
Tnfaip3Q60769 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfaip3Q60769 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfaip3Q60769 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfaip3Q60769 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfaip3Q60769 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.27□□□□□ -0.45
Tnfaip3Q60769 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfaip3Q60769 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfaip3Q60769 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfaip3Q60769 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Tnfaip3Q60769 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.27□□□□□ -0.45
Tnfaip3Q60769 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.27□□□□□ -0.45
Tnfaip3Q60769 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfaip3Q60769 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.27□□□□□ -0.45
Tnfaip3Q60769 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfaip3Q60769 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Tnfaip3Q60769 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfaip3Q60769 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfaip3Q60769 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfaip3Q60769 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfaip3Q60769 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Tnfaip3Q60769 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfaip3Q60769 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.26□□□□□ -0.45
Tnfaip3Q60769 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfaip3Q60769 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfaip3Q60769 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfaip3Q60769 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfaip3Q60769 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfaip3Q60769 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tnfaip3Q60769 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms