Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shroom1Q5SX79 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shroom1Q5SX79 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Shroom1Q5SX79 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shroom1Q5SX79 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.86□□□□□ -0.19
Shroom1Q5SX79 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shroom1Q5SX79 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Shroom1Q5SX79 Gm8805-201ENSMUST00000117848 313 ntBASIC13.86□□□□□ -0.19
Shroom1Q5SX79 Gm12241-201ENSMUST00000118330 726 ntBASIC13.86□□□□□ -0.19
Shroom1Q5SX79 Gm11591-201ENSMUST00000120063 702 ntBASIC13.86□□□□□ -0.19
Shroom1Q5SX79 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Shroom1Q5SX79 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC13.86□□□□□ -0.19
Shroom1Q5SX79 Gm43758-201ENSMUST00000199500 367 ntBASIC13.86□□□□□ -0.19
Shroom1Q5SX79 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Shroom1Q5SX79 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC13.86□□□□□ -0.19
Shroom1Q5SX79 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shroom1Q5SX79 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Shroom1Q5SX79 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Shroom1Q5SX79 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Shroom1Q5SX79 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.86□□□□□ -0.19
Shroom1Q5SX79 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shroom1Q5SX79 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shroom1Q5SX79 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Shroom1Q5SX79 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shroom1Q5SX79 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Shroom1Q5SX79 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shroom1Q5SX79 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Shroom1Q5SX79 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shroom1Q5SX79 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shroom1Q5SX79 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shroom1Q5SX79 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shroom1Q5SX79 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shroom1Q5SX79 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Shroom1Q5SX79 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shroom1Q5SX79 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shroom1Q5SX79 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shroom1Q5SX79 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shroom1Q5SX79 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shroom1Q5SX79 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Shroom1Q5SX79 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.85□□□□□ -0.19
Shroom1Q5SX79 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shroom1Q5SX79 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC13.85□□□□□ -0.19
Shroom1Q5SX79 Gm6222-202ENSMUST00000182143 629 ntBASIC13.85□□□□□ -0.19
Shroom1Q5SX79 Gm4768-201ENSMUST00000206199 686 ntBASIC13.85□□□□□ -0.19
Shroom1Q5SX79 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC13.85□□□□□ -0.19
Shroom1Q5SX79 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Shroom1Q5SX79 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shroom1Q5SX79 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Shroom1Q5SX79 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.85□□□□□ -0.19
Shroom1Q5SX79 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shroom1Q5SX79 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shroom1Q5SX79 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shroom1Q5SX79 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shroom1Q5SX79 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shroom1Q5SX79 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shroom1Q5SX79 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shroom1Q5SX79 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Shroom1Q5SX79 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shroom1Q5SX79 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shroom1Q5SX79 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Shroom1Q5SX79 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Shroom1Q5SX79 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Shroom1Q5SX79 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Shroom1Q5SX79 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.85□□□□□ -0.19
Shroom1Q5SX79 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.85□□□□□ -0.19
Shroom1Q5SX79 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shroom1Q5SX79 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.84□□□□□ -0.19
Shroom1Q5SX79 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shroom1Q5SX79 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shroom1Q5SX79 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shroom1Q5SX79 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shroom1Q5SX79 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shroom1Q5SX79 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shroom1Q5SX79 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.84□□□□□ -0.19
Shroom1Q5SX79 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Shroom1Q5SX79 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shroom1Q5SX79 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shroom1Q5SX79 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC13.84□□□□□ -0.19
Shroom1Q5SX79 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Shroom1Q5SX79 Gm7584-201ENSMUST00000175829 940 ntBASIC13.84□□□□□ -0.19
Shroom1Q5SX79 Gm28693-202ENSMUST00000190758 331 ntBASIC13.84□□□□□ -0.19
Shroom1Q5SX79 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC13.84□□□□□ -0.19
Shroom1Q5SX79 Cts7-204ENSMUST00000225321 1257 ntBASIC13.84□□□□□ -0.19
Shroom1Q5SX79 AC022775.2-201ENSMUST00000227885 646 ntBASIC13.84□□□□□ -0.19
Shroom1Q5SX79 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.84□□□□□ -0.19
Shroom1Q5SX79 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shroom1Q5SX79 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shroom1Q5SX79 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Shroom1Q5SX79 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shroom1Q5SX79 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shroom1Q5SX79 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shroom1Q5SX79 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shroom1Q5SX79 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.84□□□□□ -0.19
Shroom1Q5SX79 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shroom1Q5SX79 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shroom1Q5SX79 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.84□□□□□ -0.19
Shroom1Q5SX79 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shroom1Q5SX79 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shroom1Q5SX79 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shroom1Q5SX79 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms