Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Vps54Q5SPW0 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
Vps54Q5SPW0 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC15.62■□□□□ 0.09
Vps54Q5SPW0 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps54Q5SPW0 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Vps54Q5SPW0 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Vps54Q5SPW0 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Vps54Q5SPW0 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC15.62■□□□□ 0.09
Vps54Q5SPW0 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Vps54Q5SPW0 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC15.62■□□□□ 0.09
Vps54Q5SPW0 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vps54Q5SPW0 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
Vps54Q5SPW0 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
Vps54Q5SPW0 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
Vps54Q5SPW0 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps54Q5SPW0 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps54Q5SPW0 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps54Q5SPW0 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps54Q5SPW0 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps54Q5SPW0 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps54Q5SPW0 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps54Q5SPW0 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps54Q5SPW0 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps54Q5SPW0 Gm11658-201ENSMUST00000120913 1008 ntBASIC15.61■□□□□ 0.09
Vps54Q5SPW0 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC15.61■□□□□ 0.09
Vps54Q5SPW0 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC15.61■□□□□ 0.09
Vps54Q5SPW0 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Vps54Q5SPW0 Gm7809-201ENSMUST00000153199 742 ntBASIC15.61■□□□□ 0.09
Vps54Q5SPW0 Gm2467-201ENSMUST00000182266 1010 ntBASIC15.61■□□□□ 0.09
Vps54Q5SPW0 Gm6981-201ENSMUST00000182467 1008 ntBASIC15.61■□□□□ 0.09
Vps54Q5SPW0 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC15.61■□□□□ 0.09
Vps54Q5SPW0 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Vps54Q5SPW0 Gm19309-201ENSMUST00000218295 205 ntBASIC15.61■□□□□ 0.09
Vps54Q5SPW0 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps54Q5SPW0 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps54Q5SPW0 n-R5s195-201ENSMUST00000082891 119 ntBASIC15.61■□□□□ 0.09
Vps54Q5SPW0 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps54Q5SPW0 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps54Q5SPW0 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps54Q5SPW0 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC15.61■□□□□ 0.09
Vps54Q5SPW0 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps54Q5SPW0 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps54Q5SPW0 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps54Q5SPW0 Gm8793-201ENSMUST00000183069 1303 ntBASIC15.61■□□□□ 0.09
Vps54Q5SPW0 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps54Q5SPW0 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps54Q5SPW0 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Vps54Q5SPW0 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps54Q5SPW0 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps54Q5SPW0 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Vps54Q5SPW0 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps54Q5SPW0 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps54Q5SPW0 Gm15897-201ENSMUST00000117770 1486 ntBASIC15.6■□□□□ 0.09
Vps54Q5SPW0 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps54Q5SPW0 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Vps54Q5SPW0 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps54Q5SPW0 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps54Q5SPW0 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC15.6■□□□□ 0.09
Vps54Q5SPW0 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC15.6■□□□□ 0.09
Vps54Q5SPW0 Gm9431-201ENSMUST00000119765 1051 ntBASIC15.6■□□□□ 0.09
Vps54Q5SPW0 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC15.6■□□□□ 0.09
Vps54Q5SPW0 Gm5850-201ENSMUST00000192923 1206 ntBASIC15.6■□□□□ 0.09
Vps54Q5SPW0 Gm38002-201ENSMUST00000193255 180 ntBASIC15.6■□□□□ 0.09
Vps54Q5SPW0 Ighv8-10-201ENSMUST00000199579 358 ntBASIC15.6■□□□□ 0.09
Vps54Q5SPW0 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Vps54Q5SPW0 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps54Q5SPW0 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC15.6■□□□□ 0.09
Vps54Q5SPW0 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps54Q5SPW0 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps54Q5SPW0 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps54Q5SPW0 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps54Q5SPW0 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps54Q5SPW0 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps54Q5SPW0 Gm42863-201ENSMUST00000197875 2958 ntBASIC15.6■□□□□ 0.09
Vps54Q5SPW0 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Vps54Q5SPW0 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC15.59■□□□□ 0.09
Vps54Q5SPW0 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Vps54Q5SPW0 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC15.59■□□□□ 0.09
Vps54Q5SPW0 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
Vps54Q5SPW0 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
Vps54Q5SPW0 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps54Q5SPW0 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps54Q5SPW0 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps54Q5SPW0 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps54Q5SPW0 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps54Q5SPW0 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps54Q5SPW0 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC15.59■□□□□ 0.09
Vps54Q5SPW0 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps54Q5SPW0 AC153366.2-201ENSMUST00000219461 1984 ntBASIC15.59■□□□□ 0.09
Vps54Q5SPW0 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC15.59■□□□□ 0.09
Vps54Q5SPW0 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Vps54Q5SPW0 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Vps54Q5SPW0 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC15.59■□□□□ 0.09
Vps54Q5SPW0 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC15.59■□□□□ 0.09
Vps54Q5SPW0 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
Vps54Q5SPW0 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC15.59■□□□□ 0.09
Vps54Q5SPW0 CU024892.2-201ENSMUST00000224608 832 ntBASIC15.59■□□□□ 0.09
Vps54Q5SPW0 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps54Q5SPW0 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps54Q5SPW0 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms