Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc88aQ5SNZ0 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.84□□□□□ -0.03
Ccdc88aQ5SNZ0 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc88aQ5SNZ0 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC14.84□□□□□ -0.03
Ccdc88aQ5SNZ0 n-R5s14-201ENSMUST00000122688 107 ntBASIC14.84□□□□□ -0.03
Ccdc88aQ5SNZ0 Gm17208-201ENSMUST00000168388 535 ntBASIC14.84□□□□□ -0.03
Ccdc88aQ5SNZ0 Gm25700-201ENSMUST00000177693 110 ntBASIC14.84□□□□□ -0.03
Ccdc88aQ5SNZ0 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC14.84□□□□□ -0.03
Ccdc88aQ5SNZ0 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc88aQ5SNZ0 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc88aQ5SNZ0 Mir339-201ENSMUST00000083659 96 ntBASIC14.84□□□□□ -0.03
Ccdc88aQ5SNZ0 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc88aQ5SNZ0 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Ccdc88aQ5SNZ0 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC14.84□□□□□ -0.03
Ccdc88aQ5SNZ0 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc88aQ5SNZ0 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc88aQ5SNZ0 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc88aQ5SNZ0 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc88aQ5SNZ0 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC14.84□□□□□ -0.03
Ccdc88aQ5SNZ0 Gm3287-205ENSMUST00000228893 1332 ntBASIC14.84□□□□□ -0.03
Ccdc88aQ5SNZ0 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.84□□□□□ -0.03
Ccdc88aQ5SNZ0 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc88aQ5SNZ0 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc88aQ5SNZ0 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc88aQ5SNZ0 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc88aQ5SNZ0 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc88aQ5SNZ0 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
Ccdc88aQ5SNZ0 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc88aQ5SNZ0 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc88aQ5SNZ0 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc88aQ5SNZ0 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc88aQ5SNZ0 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc88aQ5SNZ0 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc88aQ5SNZ0 Gm38157-201ENSMUST00000194178 1698 ntBASIC14.83□□□□□ -0.03
Ccdc88aQ5SNZ0 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.03
Ccdc88aQ5SNZ0 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Ccdc88aQ5SNZ0 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Ccdc88aQ5SNZ0 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ccdc88aQ5SNZ0 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Ccdc88aQ5SNZ0 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ccdc88aQ5SNZ0 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC14.83□□□□□ -0.03
Ccdc88aQ5SNZ0 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.03
Ccdc88aQ5SNZ0 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc88aQ5SNZ0 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc88aQ5SNZ0 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc88aQ5SNZ0 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC14.83□□□□□ -0.04
Ccdc88aQ5SNZ0 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC14.83□□□□□ -0.04
Ccdc88aQ5SNZ0 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc88aQ5SNZ0 Gm43416-201ENSMUST00000201916 1015 ntBASIC14.83□□□□□ -0.04
Ccdc88aQ5SNZ0 Gm44100-201ENSMUST00000204329 436 ntBASIC14.83□□□□□ -0.04
Ccdc88aQ5SNZ0 Gm45219-201ENSMUST00000205602 465 ntBASIC14.83□□□□□ -0.04
Ccdc88aQ5SNZ0 AC131330.1-201ENSMUST00000227814 1015 ntBASIC14.83□□□□□ -0.04
Ccdc88aQ5SNZ0 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc88aQ5SNZ0 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC14.83□□□□□ -0.04
Ccdc88aQ5SNZ0 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc88aQ5SNZ0 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc88aQ5SNZ0 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc88aQ5SNZ0 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc88aQ5SNZ0 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc88aQ5SNZ0 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc88aQ5SNZ0 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc88aQ5SNZ0 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc88aQ5SNZ0 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.04
Ccdc88aQ5SNZ0 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc88aQ5SNZ0 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc88aQ5SNZ0 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc88aQ5SNZ0 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc88aQ5SNZ0 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc88aQ5SNZ0 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc88aQ5SNZ0 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc88aQ5SNZ0 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc88aQ5SNZ0 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc88aQ5SNZ0 Gm8566-201ENSMUST00000120174 465 ntBASIC14.82□□□□□ -0.04
Ccdc88aQ5SNZ0 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc88aQ5SNZ0 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc88aQ5SNZ0 Gm5523-201ENSMUST00000180415 997 ntBASIC14.82□□□□□ -0.04
Ccdc88aQ5SNZ0 Gm5051-201ENSMUST00000204085 485 ntBASIC14.82□□□□□ -0.04
Ccdc88aQ5SNZ0 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC14.82□□□□□ -0.04
Ccdc88aQ5SNZ0 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc88aQ5SNZ0 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc88aQ5SNZ0 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc88aQ5SNZ0 AC167669.2-201ENSMUST00000224417 1620 ntBASIC14.82□□□□□ -0.04
Ccdc88aQ5SNZ0 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc88aQ5SNZ0 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc88aQ5SNZ0 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc88aQ5SNZ0 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC14.82□□□□□ -0.04
Ccdc88aQ5SNZ0 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc88aQ5SNZ0 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc88aQ5SNZ0 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC14.82□□□□□ -0.04
Ccdc88aQ5SNZ0 Gm10051-201ENSMUST00000145209 414 ntBASIC14.82□□□□□ -0.04
Ccdc88aQ5SNZ0 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC14.82□□□□□ -0.04
Ccdc88aQ5SNZ0 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC14.82□□□□□ -0.04
Ccdc88aQ5SNZ0 Gm8885-201ENSMUST00000189382 598 ntBASIC14.82□□□□□ -0.04
Ccdc88aQ5SNZ0 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc88aQ5SNZ0 Gstp-ps-201ENSMUST00000195526 631 ntBASIC14.82□□□□□ -0.04
Ccdc88aQ5SNZ0 Gm42997-202ENSMUST00000200321 985 ntBASIC14.82□□□□□ -0.04
Ccdc88aQ5SNZ0 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Ccdc88aQ5SNZ0 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc88aQ5SNZ0 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc88aQ5SNZ0 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 111.3 ms