Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx49Q4FZF3 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx49Q4FZF3 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx49Q4FZF3 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx49Q4FZF3 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx49Q4FZF3 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC15.17■□□□□ 0.02
Ddx49Q4FZF3 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Ddx49Q4FZF3 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
Ddx49Q4FZF3 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx49Q4FZF3 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx49Q4FZF3 Gm42829-201ENSMUST00000198417 2585 ntBASIC15.17■□□□□ 0.02
Ddx49Q4FZF3 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx49Q4FZF3 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx49Q4FZF3 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx49Q4FZF3 Gm11531-201ENSMUST00000117614 555 ntBASIC15.17■□□□□ 0.02
Ddx49Q4FZF3 Gm14130-201ENSMUST00000118417 987 ntBASIC15.17■□□□□ 0.02
Ddx49Q4FZF3 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC15.17■□□□□ 0.02
Ddx49Q4FZF3 Gm15276-201ENSMUST00000145953 498 ntBASIC15.17■□□□□ 0.02
Ddx49Q4FZF3 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx49Q4FZF3 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
Ddx49Q4FZF3 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC15.17■□□□□ 0.02
Ddx49Q4FZF3 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC15.17■□□□□ 0.02
Ddx49Q4FZF3 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx49Q4FZF3 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx49Q4FZF3 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx49Q4FZF3 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Ddx49Q4FZF3 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx49Q4FZF3 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx49Q4FZF3 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx49Q4FZF3 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Ddx49Q4FZF3 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx49Q4FZF3 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx49Q4FZF3 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC15.17■□□□□ 0.02
Ddx49Q4FZF3 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
Ddx49Q4FZF3 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC15.17■□□□□ 0.02
Ddx49Q4FZF3 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx49Q4FZF3 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx49Q4FZF3 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
Ddx49Q4FZF3 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx49Q4FZF3 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
Ddx49Q4FZF3 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC15.16■□□□□ 0.02
Ddx49Q4FZF3 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx49Q4FZF3 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx49Q4FZF3 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx49Q4FZF3 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC15.16■□□□□ 0.02
Ddx49Q4FZF3 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx49Q4FZF3 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx49Q4FZF3 Gm38094-201ENSMUST00000195864 2978 ntBASIC15.16■□□□□ 0.02
Ddx49Q4FZF3 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC15.16■□□□□ 0.02
Ddx49Q4FZF3 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC15.16■□□□□ 0.02
Ddx49Q4FZF3 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx49Q4FZF3 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx49Q4FZF3 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Ddx49Q4FZF3 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx49Q4FZF3 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx49Q4FZF3 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx49Q4FZF3 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx49Q4FZF3 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx49Q4FZF3 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx49Q4FZF3 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx49Q4FZF3 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Ddx49Q4FZF3 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx49Q4FZF3 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx49Q4FZF3 Gm25214-201ENSMUST00000104573 129 ntBASIC15.16■□□□□ 0.02
Ddx49Q4FZF3 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Ddx49Q4FZF3 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx49Q4FZF3 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Ddx49Q4FZF3 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx49Q4FZF3 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx49Q4FZF3 Gm24514-201ENSMUST00000174961 285 ntBASIC15.16■□□□□ 0.02
Ddx49Q4FZF3 Mir6927-201ENSMUST00000184494 71 ntBASIC15.16■□□□□ 0.02
Ddx49Q4FZF3 Gm6458-201ENSMUST00000211573 635 ntBASIC15.16■□□□□ 0.02
Ddx49Q4FZF3 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx49Q4FZF3 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx49Q4FZF3 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Ddx49Q4FZF3 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx49Q4FZF3 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
Ddx49Q4FZF3 AC167669.2-201ENSMUST00000224417 1620 ntBASIC15.16■□□□□ 0.02
Ddx49Q4FZF3 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx49Q4FZF3 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx49Q4FZF3 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Ddx49Q4FZF3 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC15.16■□□□□ 0.02
Ddx49Q4FZF3 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx49Q4FZF3 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx49Q4FZF3 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx49Q4FZF3 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx49Q4FZF3 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
Ddx49Q4FZF3 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx49Q4FZF3 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
Ddx49Q4FZF3 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx49Q4FZF3 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx49Q4FZF3 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Ddx49Q4FZF3 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Ddx49Q4FZF3 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx49Q4FZF3 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx49Q4FZF3 Gm7857-201ENSMUST00000117957 358 ntBASIC15.15■□□□□ 0.02
Ddx49Q4FZF3 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
Ddx49Q4FZF3 Gm22334-201ENSMUST00000158070 133 ntBASIC15.15■□□□□ 0.02
Ddx49Q4FZF3 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC15.15■□□□□ 0.02
Ddx49Q4FZF3 AA914427-201ENSMUST00000193194 1166 ntBASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms