Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trim80Q3V061 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim80Q3V061 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim80Q3V061 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim80Q3V061 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim80Q3V061 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim80Q3V061 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim80Q3V061 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.49□□□□□ -0.25
Trim80Q3V061 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.49□□□□□ -0.25
Trim80Q3V061 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.49□□□□□ -0.25
Trim80Q3V061 Gm23984-201ENSMUST00000157139 203 ntBASIC13.49□□□□□ -0.25
Trim80Q3V061 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Trim80Q3V061 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.49□□□□□ -0.25
Trim80Q3V061 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim80Q3V061 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.49□□□□□ -0.25
Trim80Q3V061 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.49□□□□□ -0.25
Trim80Q3V061 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trim80Q3V061 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.49□□□□□ -0.25
Trim80Q3V061 Gm9229-201ENSMUST00000222777 126 ntBASIC13.49□□□□□ -0.25
Trim80Q3V061 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.49□□□□□ -0.25
Trim80Q3V061 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim80Q3V061 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim80Q3V061 Gm25857-201ENSMUST00000082788 129 ntBASIC13.49□□□□□ -0.25
Trim80Q3V061 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim80Q3V061 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim80Q3V061 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Trim80Q3V061 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.49□□□□□ -0.25
Trim80Q3V061 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim80Q3V061 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.49□□□□□ -0.25
Trim80Q3V061 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim80Q3V061 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim80Q3V061 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim80Q3V061 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim80Q3V061 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim80Q3V061 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim80Q3V061 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC13.48□□□□□ -0.25
Trim80Q3V061 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.48□□□□□ -0.25
Trim80Q3V061 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim80Q3V061 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim80Q3V061 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim80Q3V061 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Trim80Q3V061 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim80Q3V061 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim80Q3V061 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim80Q3V061 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim80Q3V061 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim80Q3V061 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.48□□□□□ -0.25
Trim80Q3V061 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim80Q3V061 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trim80Q3V061 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Trim80Q3V061 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim80Q3V061 Gm27631-201ENSMUST00000184163 466 ntBASIC13.48□□□□□ -0.25
Trim80Q3V061 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.48□□□□□ -0.25
Trim80Q3V061 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim80Q3V061 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim80Q3V061 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.48□□□□□ -0.25
Trim80Q3V061 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim80Q3V061 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trim80Q3V061 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim80Q3V061 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trim80Q3V061 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim80Q3V061 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim80Q3V061 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim80Q3V061 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim80Q3V061 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim80Q3V061 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim80Q3V061 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
Trim80Q3V061 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trim80Q3V061 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim80Q3V061 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim80Q3V061 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim80Q3V061 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim80Q3V061 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trim80Q3V061 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.47□□□□□ -0.25
Trim80Q3V061 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim80Q3V061 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim80Q3V061 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim80Q3V061 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.47□□□□□ -0.25
Trim80Q3V061 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.47□□□□□ -0.25
Trim80Q3V061 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim80Q3V061 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim80Q3V061 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Trim80Q3V061 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim80Q3V061 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.47□□□□□ -0.25
Trim80Q3V061 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.47□□□□□ -0.25
Trim80Q3V061 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim80Q3V061 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.47□□□□□ -0.25
Trim80Q3V061 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim80Q3V061 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim80Q3V061 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC13.47□□□□□ -0.25
Trim80Q3V061 Gm42612-201ENSMUST00000197986 623 ntBASIC13.47□□□□□ -0.25
Trim80Q3V061 Gm43170-201ENSMUST00000199827 612 ntBASIC13.47□□□□□ -0.25
Trim80Q3V061 Gm45453-201ENSMUST00000211758 853 ntBASIC13.47□□□□□ -0.25
Trim80Q3V061 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.47□□□□□ -0.25
Trim80Q3V061 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.47□□□□□ -0.25
Trim80Q3V061 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim80Q3V061 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Trim80Q3V061 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim80Q3V061 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim80Q3V061 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms