Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC13.06□□□□□ -0.32
Fam196aQ3USH1 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Gm37827-201ENSMUST00000194486 1542 ntBASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Gm2673-201ENSMUST00000120958 1608 ntBASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Fam196aQ3USH1 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Fam196aQ3USH1 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Fam196aQ3USH1 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.05□□□□□ -0.32
Fam196aQ3USH1 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Fam196aQ3USH1 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.05□□□□□ -0.32
Fam196aQ3USH1 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Fam196aQ3USH1 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Fam196aQ3USH1 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Fam196aQ3USH1 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Fam196aQ3USH1 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Fam196aQ3USH1 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Fam196aQ3USH1 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Fam196aQ3USH1 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Fam196aQ3USH1 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Fam196aQ3USH1 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Fam196aQ3USH1 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Fam196aQ3USH1 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Fam196aQ3USH1 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Fam196aQ3USH1 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Fam196aQ3USH1 Gm12165-201ENSMUST00000117047 342 ntBASIC13.05□□□□□ -0.32
Fam196aQ3USH1 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC13.05□□□□□ -0.32
Fam196aQ3USH1 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC13.05□□□□□ -0.32
Fam196aQ3USH1 Gm38210-201ENSMUST00000191944 809 ntBASIC13.05□□□□□ -0.32
Fam196aQ3USH1 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Fam196aQ3USH1 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Fam196aQ3USH1 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.05□□□□□ -0.32
Fam196aQ3USH1 AC166992.1-201ENSMUST00000216356 565 ntBASIC13.05□□□□□ -0.32
Fam196aQ3USH1 AC166344.1-202ENSMUST00000224139 234 ntBASIC13.05□□□□□ -0.32
Fam196aQ3USH1 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Fam196aQ3USH1 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Fam196aQ3USH1 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Fam196aQ3USH1 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Fam196aQ3USH1 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Fam196aQ3USH1 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Fam196aQ3USH1 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Fam196aQ3USH1 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Fam196aQ3USH1 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Fam196aQ3USH1 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Fam196aQ3USH1 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Fam196aQ3USH1 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Fam196aQ3USH1 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Fam196aQ3USH1 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Fam196aQ3USH1 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Fam196aQ3USH1 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Fam196aQ3USH1 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Fam196aQ3USH1 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Fam196aQ3USH1 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Fam196aQ3USH1 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.04□□□□□ -0.32
Fam196aQ3USH1 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Fam196aQ3USH1 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Fam196aQ3USH1 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.04□□□□□ -0.32
Fam196aQ3USH1 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Fam196aQ3USH1 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Fam196aQ3USH1 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.04□□□□□ -0.32
Fam196aQ3USH1 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Fam196aQ3USH1 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC13.04□□□□□ -0.32
Fam196aQ3USH1 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Fam196aQ3USH1 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC13.04□□□□□ -0.32
Fam196aQ3USH1 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC13.04□□□□□ -0.32
Fam196aQ3USH1 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.04□□□□□ -0.32
Fam196aQ3USH1 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.04□□□□□ -0.32
Fam196aQ3USH1 Gm43916-201ENSMUST00000205062 967 ntBASIC13.04□□□□□ -0.32
Fam196aQ3USH1 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.04□□□□□ -0.32
Fam196aQ3USH1 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC13.04□□□□□ -0.32
Fam196aQ3USH1 AC132901.1-201ENSMUST00000224345 508 ntBASIC13.04□□□□□ -0.32
Fam196aQ3USH1 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Fam196aQ3USH1 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Fam196aQ3USH1 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Fam196aQ3USH1 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Fam196aQ3USH1 AC091458.1-201ENSMUST00000220902 1361 ntBASIC13.04□□□□□ -0.32
Fam196aQ3USH1 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Fam196aQ3USH1 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Fam196aQ3USH1 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Fam196aQ3USH1 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Fam196aQ3USH1 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Fam196aQ3USH1 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Fam196aQ3USH1 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms