Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Gm27701-201ENSMUST00000184498 110 ntBASIC12.28□□□□□ -0.44
Brf2Q3UAW9 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.28□□□□□ -0.44
Brf2Q3UAW9 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.28□□□□□ -0.44
Brf2Q3UAW9 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Brf2Q3UAW9 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.28□□□□□ -0.44
Brf2Q3UAW9 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Brf2Q3UAW9 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Brf2Q3UAW9 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Brf2Q3UAW9 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Brf2Q3UAW9 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Brf2Q3UAW9 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Brf2Q3UAW9 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Brf2Q3UAW9 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Brf2Q3UAW9 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Brf2Q3UAW9 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Brf2Q3UAW9 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Brf2Q3UAW9 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Brf2Q3UAW9 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Brf2Q3UAW9 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Brf2Q3UAW9 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Brf2Q3UAW9 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Brf2Q3UAW9 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Brf2Q3UAW9 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Brf2Q3UAW9 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Brf2Q3UAW9 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Brf2Q3UAW9 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Brf2Q3UAW9 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.28□□□□□ -0.44
Brf2Q3UAW9 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Brf2Q3UAW9 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.27□□□□□ -0.44
Brf2Q3UAW9 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Brf2Q3UAW9 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Brf2Q3UAW9 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Brf2Q3UAW9 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Brf2Q3UAW9 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Brf2Q3UAW9 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Brf2Q3UAW9 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.27□□□□□ -0.44
Brf2Q3UAW9 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Brf2Q3UAW9 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Brf2Q3UAW9 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Brf2Q3UAW9 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Brf2Q3UAW9 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Brf2Q3UAW9 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.27□□□□□ -0.45
Brf2Q3UAW9 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Brf2Q3UAW9 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.27□□□□□ -0.45
Brf2Q3UAW9 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.27□□□□□ -0.45
Brf2Q3UAW9 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Brf2Q3UAW9 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Brf2Q3UAW9 Gm2495-201ENSMUST00000191160 466 ntBASIC12.27□□□□□ -0.45
Brf2Q3UAW9 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.27□□□□□ -0.45
Brf2Q3UAW9 Gm8515-201ENSMUST00000194852 576 ntBASIC12.27□□□□□ -0.45
Brf2Q3UAW9 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.27□□□□□ -0.45
Brf2Q3UAW9 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.27□□□□□ -0.45
Brf2Q3UAW9 Gm6458-201ENSMUST00000211573 635 ntBASIC12.27□□□□□ -0.45
Brf2Q3UAW9 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.27□□□□□ -0.45
Brf2Q3UAW9 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Brf2Q3UAW9 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Brf2Q3UAW9 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Brf2Q3UAW9 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Brf2Q3UAW9 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Brf2Q3UAW9 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Brf2Q3UAW9 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.27□□□□□ -0.45
Brf2Q3UAW9 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.27□□□□□ -0.45
Brf2Q3UAW9 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Brf2Q3UAW9 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Brf2Q3UAW9 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Brf2Q3UAW9 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.27□□□□□ -0.45
Brf2Q3UAW9 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Brf2Q3UAW9 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Brf2Q3UAW9 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Brf2Q3UAW9 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Brf2Q3UAW9 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Brf2Q3UAW9 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Brf2Q3UAW9 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Brf2Q3UAW9 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Brf2Q3UAW9 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Brf2Q3UAW9 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Brf2Q3UAW9 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.26□□□□□ -0.45
Brf2Q3UAW9 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Brf2Q3UAW9 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Brf2Q3UAW9 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Brf2Q3UAW9 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Brf2Q3UAW9 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Brf2Q3UAW9 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Brf2Q3UAW9 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Brf2Q3UAW9 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.26□□□□□ -0.45
Brf2Q3UAW9 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Brf2Q3UAW9 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Brf2Q3UAW9 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.26□□□□□ -0.45
Brf2Q3UAW9 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Brf2Q3UAW9 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Brf2Q3UAW9 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.26□□□□□ -0.45
Brf2Q3UAW9 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Brf2Q3UAW9 Gm44069-201ENSMUST00000204898 506 ntBASIC12.26□□□□□ -0.45
Brf2Q3UAW9 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Brf2Q3UAW9 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.26□□□□□ -0.45
Brf2Q3UAW9 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Brf2Q3UAW9 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Brf2Q3UAW9 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Brf2Q3UAW9 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Brf2Q3UAW9 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms