Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43aQ3TL54 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43aQ3TL54 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43aQ3TL54 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43aQ3TL54 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43aQ3TL54 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43aQ3TL54 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trim43aQ3TL54 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43aQ3TL54 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Trim43aQ3TL54 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.82□□□□□ -0.2
Trim43aQ3TL54 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.82□□□□□ -0.2
Trim43aQ3TL54 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43aQ3TL54 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43aQ3TL54 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43aQ3TL54 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43aQ3TL54 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43aQ3TL54 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43aQ3TL54 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trim43aQ3TL54 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43aQ3TL54 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC13.82□□□□□ -0.2
Trim43aQ3TL54 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43aQ3TL54 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.82□□□□□ -0.2
Trim43aQ3TL54 Syt7-204ENSMUST00000223586 1344 ntBASIC13.82□□□□□ -0.2
Trim43aQ3TL54 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13.82□□□□□ -0.2
Trim43aQ3TL54 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43aQ3TL54 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43aQ3TL54 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43aQ3TL54 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43aQ3TL54 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43aQ3TL54 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43aQ3TL54 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43aQ3TL54 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43aQ3TL54 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Trim43aQ3TL54 AC164702.1-201ENSMUST00000220135 2212 ntBASIC13.82□□□□□ -0.2
Trim43aQ3TL54 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43aQ3TL54 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim43aQ3TL54 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim43aQ3TL54 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim43aQ3TL54 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.81□□□□□ -0.2
Trim43aQ3TL54 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.81□□□□□ -0.2
Trim43aQ3TL54 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim43aQ3TL54 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.81□□□□□ -0.2
Trim43aQ3TL54 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.81□□□□□ -0.2
Trim43aQ3TL54 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim43aQ3TL54 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim43aQ3TL54 Gm44292-201ENSMUST00000205194 2364 ntBASIC13.81□□□□□ -0.2
Trim43aQ3TL54 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim43aQ3TL54 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim43aQ3TL54 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim43aQ3TL54 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Trim43aQ3TL54 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim43aQ3TL54 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trim43aQ3TL54 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim43aQ3TL54 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim43aQ3TL54 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trim43aQ3TL54 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.81□□□□□ -0.2
Trim43aQ3TL54 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim43aQ3TL54 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim43aQ3TL54 Gm12485-201ENSMUST00000119641 291 ntBASIC13.81□□□□□ -0.2
Trim43aQ3TL54 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.81□□□□□ -0.2
Trim43aQ3TL54 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim43aQ3TL54 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim43aQ3TL54 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Trim43aQ3TL54 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Trim43aQ3TL54 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim43aQ3TL54 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim43aQ3TL54 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim43aQ3TL54 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.81□□□□□ -0.2
Trim43aQ3TL54 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim43aQ3TL54 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim43aQ3TL54 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim43aQ3TL54 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim43aQ3TL54 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim43aQ3TL54 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim43aQ3TL54 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trim43aQ3TL54 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim43aQ3TL54 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trim43aQ3TL54 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43aQ3TL54 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.8□□□□□ -0.2
Trim43aQ3TL54 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43aQ3TL54 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trim43aQ3TL54 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43aQ3TL54 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43aQ3TL54 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43aQ3TL54 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43aQ3TL54 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43aQ3TL54 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43aQ3TL54 Matn2-203ENSMUST00000226766 3252 ntBASIC13.8□□□□□ -0.2
Trim43aQ3TL54 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43aQ3TL54 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.8□□□□□ -0.2
Trim43aQ3TL54 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
Trim43aQ3TL54 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43aQ3TL54 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Trim43aQ3TL54 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43aQ3TL54 Gm4875-201ENSMUST00000118257 786 ntBASIC13.8□□□□□ -0.2
Trim43aQ3TL54 Gm15487-201ENSMUST00000122373 465 ntBASIC13.8□□□□□ -0.2
Trim43aQ3TL54 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43aQ3TL54 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43aQ3TL54 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim43aQ3TL54 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms