Protein–RNA interactions for Protein: Q3TJD7

Pdlim7, PDZ and LIM domain protein 7, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim7Q3TJD7 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Pdlim7Q3TJD7 Gm6335-201ENSMUST00000118081 1194 ntBASIC14.52□□□□□ -0.09
Pdlim7Q3TJD7 Gm7816-201ENSMUST00000119884 1194 ntBASIC14.52□□□□□ -0.09
Pdlim7Q3TJD7 Gm15542-201ENSMUST00000121585 1194 ntBASIC14.52□□□□□ -0.09
Pdlim7Q3TJD7 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pdlim7Q3TJD7 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC14.52□□□□□ -0.09
Pdlim7Q3TJD7 Gm17040-202ENSMUST00000170597 889 ntBASIC14.52□□□□□ -0.09
Pdlim7Q3TJD7 Gm37201-201ENSMUST00000191845 523 ntBASIC14.52□□□□□ -0.09
Pdlim7Q3TJD7 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pdlim7Q3TJD7 Gm9555-201ENSMUST00000200908 583 ntBASIC14.52□□□□□ -0.09
Pdlim7Q3TJD7 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Pdlim7Q3TJD7 AC154222.2-201ENSMUST00000225848 607 ntBASIC14.52□□□□□ -0.09
Pdlim7Q3TJD7 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pdlim7Q3TJD7 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pdlim7Q3TJD7 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pdlim7Q3TJD7 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pdlim7Q3TJD7 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pdlim7Q3TJD7 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Pdlim7Q3TJD7 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pdlim7Q3TJD7 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pdlim7Q3TJD7 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pdlim7Q3TJD7 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pdlim7Q3TJD7 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
Pdlim7Q3TJD7 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pdlim7Q3TJD7 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Pdlim7Q3TJD7 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pdlim7Q3TJD7 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pdlim7Q3TJD7 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pdlim7Q3TJD7 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim7Q3TJD7 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim7Q3TJD7 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
Pdlim7Q3TJD7 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim7Q3TJD7 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim7Q3TJD7 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim7Q3TJD7 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
Pdlim7Q3TJD7 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Pdlim7Q3TJD7 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC14.51□□□□□ -0.09
Pdlim7Q3TJD7 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
Pdlim7Q3TJD7 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim7Q3TJD7 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Pdlim7Q3TJD7 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim7Q3TJD7 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim7Q3TJD7 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
Pdlim7Q3TJD7 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim7Q3TJD7 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim7Q3TJD7 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim7Q3TJD7 Gm13736-201ENSMUST00000119272 253 ntBASIC14.51□□□□□ -0.09
Pdlim7Q3TJD7 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim7Q3TJD7 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim7Q3TJD7 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim7Q3TJD7 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC14.51□□□□□ -0.09
Pdlim7Q3TJD7 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Pdlim7Q3TJD7 Rprl1-202ENSMUST00000198476 238 ntBASIC14.51□□□□□ -0.09
Pdlim7Q3TJD7 Gm43416-201ENSMUST00000201916 1015 ntBASIC14.51□□□□□ -0.09
Pdlim7Q3TJD7 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC14.51□□□□□ -0.09
Pdlim7Q3TJD7 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim7Q3TJD7 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim7Q3TJD7 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Pdlim7Q3TJD7 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim7Q3TJD7 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.51□□□□□ -0.09
Pdlim7Q3TJD7 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim7Q3TJD7 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim7Q3TJD7 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim7Q3TJD7 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.51□□□□□ -0.09
Pdlim7Q3TJD7 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim7Q3TJD7 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim7Q3TJD7 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC14.5□□□□□ -0.09
Pdlim7Q3TJD7 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim7Q3TJD7 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim7Q3TJD7 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim7Q3TJD7 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
Pdlim7Q3TJD7 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim7Q3TJD7 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim7Q3TJD7 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim7Q3TJD7 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim7Q3TJD7 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim7Q3TJD7 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim7Q3TJD7 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim7Q3TJD7 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim7Q3TJD7 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim7Q3TJD7 Gm13813-201ENSMUST00000120998 787 ntBASIC14.5□□□□□ -0.09
Pdlim7Q3TJD7 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC14.5□□□□□ -0.09
Pdlim7Q3TJD7 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC14.5□□□□□ -0.09
Pdlim7Q3TJD7 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim7Q3TJD7 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC14.5□□□□□ -0.09
Pdlim7Q3TJD7 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim7Q3TJD7 Ighv8-10-201ENSMUST00000199579 358 ntBASIC14.5□□□□□ -0.09
Pdlim7Q3TJD7 Gm18730-201ENSMUST00000218038 343 ntBASIC14.5□□□□□ -0.09
Pdlim7Q3TJD7 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC14.5□□□□□ -0.09
Pdlim7Q3TJD7 Gm45925-201ENSMUST00000218882 744 ntBASIC14.5□□□□□ -0.09
Pdlim7Q3TJD7 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim7Q3TJD7 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Pdlim7Q3TJD7 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim7Q3TJD7 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Pdlim7Q3TJD7 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim7Q3TJD7 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim7Q3TJD7 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim7Q3TJD7 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim7Q3TJD7 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim7Q3TJD7 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms