Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC12.63□□□□□ -0.39
Msx2Q03358 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.63□□□□□ -0.39
Msx2Q03358 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC12.63□□□□□ -0.39
Msx2Q03358 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC12.63□□□□□ -0.39
Msx2Q03358 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC12.63□□□□□ -0.39
Msx2Q03358 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.63□□□□□ -0.39
Msx2Q03358 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.63□□□□□ -0.39
Msx2Q03358 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Msx2Q03358 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Msx2Q03358 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Msx2Q03358 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Msx2Q03358 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Msx2Q03358 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Msx2Q03358 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.63□□□□□ -0.39
Msx2Q03358 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Msx2Q03358 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Msx2Q03358 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Msx2Q03358 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Msx2Q03358 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.62□□□□□ -0.39
Msx2Q03358 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Msx2Q03358 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Msx2Q03358 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.62□□□□□ -0.39
Msx2Q03358 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.62□□□□□ -0.39
Msx2Q03358 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.62□□□□□ -0.39
Msx2Q03358 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Msx2Q03358 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Msx2Q03358 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.62□□□□□ -0.39
Msx2Q03358 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Msx2Q03358 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.62□□□□□ -0.39
Msx2Q03358 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Msx2Q03358 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Msx2Q03358 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Msx2Q03358 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Msx2Q03358 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Msx2Q03358 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC12.62□□□□□ -0.39
Msx2Q03358 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Msx2Q03358 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.62□□□□□ -0.39
Msx2Q03358 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.62□□□□□ -0.39
Msx2Q03358 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Msx2Q03358 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Msx2Q03358 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.62□□□□□ -0.39
Msx2Q03358 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.62□□□□□ -0.39
Msx2Q03358 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Msx2Q03358 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Msx2Q03358 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.62□□□□□ -0.39
Msx2Q03358 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.62□□□□□ -0.39
Msx2Q03358 Gm17330-201ENSMUST00000221047 165 ntBASIC12.62□□□□□ -0.39
Msx2Q03358 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.62□□□□□ -0.39
Msx2Q03358 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Msx2Q03358 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Msx2Q03358 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Msx2Q03358 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Msx2Q03358 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Msx2Q03358 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Msx2Q03358 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Msx2Q03358 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Msx2Q03358 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Msx2Q03358 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Msx2Q03358 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.62□□□□□ -0.39
Msx2Q03358 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.62□□□□□ -0.39
Msx2Q03358 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Msx2Q03358 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Msx2Q03358 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Msx2Q03358 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.62□□□□□ -0.39
Msx2Q03358 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Msx2Q03358 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Msx2Q03358 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Msx2Q03358 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Msx2Q03358 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Msx2Q03358 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Msx2Q03358 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Msx2Q03358 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Msx2Q03358 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Msx2Q03358 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Msx2Q03358 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.61□□□□□ -0.39
Msx2Q03358 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.61□□□□□ -0.39
Msx2Q03358 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Msx2Q03358 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Msx2Q03358 Mir449b-201ENSMUST00000104833 80 ntBASIC12.61□□□□□ -0.39
Msx2Q03358 Gm15693-201ENSMUST00000120470 637 ntBASIC12.61□□□□□ -0.39
Msx2Q03358 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.61□□□□□ -0.39
Msx2Q03358 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC12.61□□□□□ -0.39
Msx2Q03358 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.61□□□□□ -0.39
Msx2Q03358 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Msx2Q03358 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.61□□□□□ -0.39
Msx2Q03358 Gm18905-201ENSMUST00000205454 928 ntBASIC12.61□□□□□ -0.39
Msx2Q03358 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Msx2Q03358 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Msx2Q03358 AC153937.1-201ENSMUST00000218734 412 ntBASIC12.61□□□□□ -0.39
Msx2Q03358 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.61□□□□□ -0.39
Msx2Q03358 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Msx2Q03358 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Msx2Q03358 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Msx2Q03358 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Msx2Q03358 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Msx2Q03358 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Msx2Q03358 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Msx2Q03358 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Msx2Q03358 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Msx2Q03358 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms