Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smarcc1P97496 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Smarcc1P97496 Gm16481-201ENSMUST00000119074 1227 ntBASIC16.24■□□□□ 0.19
Smarcc1P97496 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
Smarcc1P97496 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smarcc1P97496 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Smarcc1P97496 Gm8913-201ENSMUST00000209491 641 ntBASIC16.24■□□□□ 0.19
Smarcc1P97496 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smarcc1P97496 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smarcc1P97496 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smarcc1P97496 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smarcc1P97496 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Smarcc1P97496 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smarcc1P97496 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Smarcc1P97496 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smarcc1P97496 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smarcc1P97496 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Smarcc1P97496 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Smarcc1P97496 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Smarcc1P97496 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smarcc1P97496 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Smarcc1P97496 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smarcc1P97496 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smarcc1P97496 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smarcc1P97496 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC16.23■□□□□ 0.19
Smarcc1P97496 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smarcc1P97496 n-R5s14-201ENSMUST00000122688 107 ntBASIC16.23■□□□□ 0.19
Smarcc1P97496 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC16.23■□□□□ 0.19
Smarcc1P97496 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smarcc1P97496 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Smarcc1P97496 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smarcc1P97496 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smarcc1P97496 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Smarcc1P97496 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Smarcc1P97496 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Smarcc1P97496 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smarcc1P97496 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Smarcc1P97496 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smarcc1P97496 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC16.23■□□□□ 0.19
Smarcc1P97496 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Smarcc1P97496 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smarcc1P97496 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Smarcc1P97496 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smarcc1P97496 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Smarcc1P97496 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Smarcc1P97496 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smarcc1P97496 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC16.23■□□□□ 0.19
Smarcc1P97496 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Smarcc1P97496 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smarcc1P97496 Gm6992-201ENSMUST00000217973 1607 ntBASIC16.23■□□□□ 0.19
Smarcc1P97496 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smarcc1P97496 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smarcc1P97496 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Smarcc1P97496 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
Smarcc1P97496 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Smarcc1P97496 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Smarcc1P97496 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC16.22■□□□□ 0.19
Smarcc1P97496 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcc1P97496 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcc1P97496 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcc1P97496 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Smarcc1P97496 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcc1P97496 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcc1P97496 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Smarcc1P97496 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Smarcc1P97496 Gm12616-201ENSMUST00000118594 382 ntBASIC16.22■□□□□ 0.19
Smarcc1P97496 Gm13736-201ENSMUST00000119272 253 ntBASIC16.22■□□□□ 0.19
Smarcc1P97496 Gm15782-201ENSMUST00000121073 445 ntBASIC16.22■□□□□ 0.19
Smarcc1P97496 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Smarcc1P97496 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC16.22■□□□□ 0.19
Smarcc1P97496 Gm12624-201ENSMUST00000177615 382 ntBASIC16.22■□□□□ 0.19
Smarcc1P97496 Gm12621-201ENSMUST00000177760 382 ntBASIC16.22■□□□□ 0.19
Smarcc1P97496 Gm12615-201ENSMUST00000177970 382 ntBASIC16.22■□□□□ 0.19
Smarcc1P97496 Gm12622-201ENSMUST00000177975 382 ntBASIC16.22■□□□□ 0.19
Smarcc1P97496 Gm12627-201ENSMUST00000178412 382 ntBASIC16.22■□□□□ 0.19
Smarcc1P97496 Gm12625-201ENSMUST00000179122 382 ntBASIC16.22■□□□□ 0.19
Smarcc1P97496 Gm12614-201ENSMUST00000179586 382 ntBASIC16.22■□□□□ 0.19
Smarcc1P97496 Gm12613-201ENSMUST00000180323 382 ntBASIC16.22■□□□□ 0.19
Smarcc1P97496 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC16.22■□□□□ 0.19
Smarcc1P97496 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcc1P97496 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC16.22■□□□□ 0.19
Smarcc1P97496 Gm45118-201ENSMUST00000208928 825 ntBASIC16.22■□□□□ 0.19
Smarcc1P97496 AC154222.2-201ENSMUST00000225848 607 ntBASIC16.22■□□□□ 0.19
Smarcc1P97496 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Smarcc1P97496 Gm10312-201ENSMUST00000078515 489 ntBASIC16.22■□□□□ 0.19
Smarcc1P97496 Gm10702-201ENSMUST00000098929 1268 ntBASIC16.22■□□□□ 0.19
Smarcc1P97496 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcc1P97496 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcc1P97496 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcc1P97496 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Smarcc1P97496 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Smarcc1P97496 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcc1P97496 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcc1P97496 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcc1P97496 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcc1P97496 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcc1P97496 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcc1P97496 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcc1P97496 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smarcc1P97496 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms