Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lig3P97386 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lig3P97386 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC14.26□□□□□ -0.13
Lig3P97386 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC14.26□□□□□ -0.13
Lig3P97386 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lig3P97386 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.26□□□□□ -0.13
Lig3P97386 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC14.26□□□□□ -0.13
Lig3P97386 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.26□□□□□ -0.13
Lig3P97386 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.26□□□□□ -0.13
Lig3P97386 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Lig3P97386 Gm18473-201ENSMUST00000220543 868 ntBASIC14.26□□□□□ -0.13
Lig3P97386 AC133598.1-201ENSMUST00000224327 660 ntBASIC14.26□□□□□ -0.13
Lig3P97386 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Lig3P97386 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lig3P97386 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Lig3P97386 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lig3P97386 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Lig3P97386 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Lig3P97386 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lig3P97386 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lig3P97386 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Lig3P97386 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lig3P97386 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Lig3P97386 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lig3P97386 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Lig3P97386 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lig3P97386 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lig3P97386 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lig3P97386 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Lig3P97386 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lig3P97386 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lig3P97386 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lig3P97386 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lig3P97386 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Lig3P97386 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lig3P97386 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lig3P97386 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Lig3P97386 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Lig3P97386 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lig3P97386 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lig3P97386 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC14.25□□□□□ -0.13
Lig3P97386 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Lig3P97386 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Lig3P97386 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lig3P97386 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC14.25□□□□□ -0.13
Lig3P97386 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.25□□□□□ -0.13
Lig3P97386 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lig3P97386 Gm27331-201ENSMUST00000183705 60 ntBASIC14.25□□□□□ -0.13
Lig3P97386 Gm37008-201ENSMUST00000195712 319 ntBASIC14.25□□□□□ -0.13
Lig3P97386 Gm42627-201ENSMUST00000197347 224 ntBASIC14.25□□□□□ -0.13
Lig3P97386 Gm9176-201ENSMUST00000219955 1120 ntBASIC14.25□□□□□ -0.13
Lig3P97386 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.25□□□□□ -0.13
Lig3P97386 AC134335.2-201ENSMUST00000227660 440 ntBASIC14.25□□□□□ -0.13
Lig3P97386 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lig3P97386 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lig3P97386 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lig3P97386 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lig3P97386 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lig3P97386 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lig3P97386 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Lig3P97386 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.25□□□□□ -0.13
Lig3P97386 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lig3P97386 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lig3P97386 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lig3P97386 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Lig3P97386 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lig3P97386 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lig3P97386 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lig3P97386 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lig3P97386 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lig3P97386 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC14.24□□□□□ -0.13
Lig3P97386 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lig3P97386 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lig3P97386 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lig3P97386 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lig3P97386 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lig3P97386 Gm10339-203ENSMUST00000225409 1671 ntBASIC14.24□□□□□ -0.13
Lig3P97386 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lig3P97386 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC14.24□□□□□ -0.13
Lig3P97386 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lig3P97386 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lig3P97386 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.24□□□□□ -0.13
Lig3P97386 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.24□□□□□ -0.13
Lig3P97386 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lig3P97386 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Lig3P97386 Gm22018-201ENSMUST00000104357 131 ntBASIC14.24□□□□□ -0.13
Lig3P97386 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Lig3P97386 Gm12485-201ENSMUST00000119641 291 ntBASIC14.24□□□□□ -0.13
Lig3P97386 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC14.24□□□□□ -0.13
Lig3P97386 Gm8810-201ENSMUST00000172895 754 ntBASIC14.24□□□□□ -0.13
Lig3P97386 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Lig3P97386 Gm27772-201ENSMUST00000184900 187 ntBASIC14.24□□□□□ -0.13
Lig3P97386 Gm38223-201ENSMUST00000194484 695 ntBASIC14.24□□□□□ -0.13
Lig3P97386 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lig3P97386 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC14.24□□□□□ -0.13
Lig3P97386 Gm29705-201ENSMUST00000212598 474 ntBASIC14.24□□□□□ -0.13
Lig3P97386 Gm17823-201ENSMUST00000217830 1006 ntBASIC14.24□□□□□ -0.13
Lig3P97386 AC140406.1-201ENSMUST00000226481 465 ntBASIC14.24□□□□□ -0.13
Lig3P97386 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lig3P97386 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms