Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43cP86449 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC14.16□□□□□ -0.14
Trim43cP86449 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trim43cP86449 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43cP86449 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC14.16□□□□□ -0.14
Trim43cP86449 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43cP86449 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43cP86449 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43cP86449 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43cP86449 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43cP86449 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43cP86449 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43cP86449 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim43cP86449 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim43cP86449 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC14.15□□□□□ -0.14
Trim43cP86449 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim43cP86449 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim43cP86449 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trim43cP86449 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim43cP86449 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim43cP86449 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim43cP86449 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim43cP86449 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC14.15□□□□□ -0.14
Trim43cP86449 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim43cP86449 Gm38049-201ENSMUST00000195698 1372 ntBASIC14.15□□□□□ -0.14
Trim43cP86449 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim43cP86449 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim43cP86449 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC14.15□□□□□ -0.14
Trim43cP86449 Gm17150-201ENSMUST00000165577 381 ntBASIC14.15□□□□□ -0.14
Trim43cP86449 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC14.15□□□□□ -0.14
Trim43cP86449 Gm27847-201ENSMUST00000183711 107 ntBASIC14.15□□□□□ -0.14
Trim43cP86449 Gm27375-201ENSMUST00000183799 107 ntBASIC14.15□□□□□ -0.14
Trim43cP86449 Gm27839-201ENSMUST00000184242 106 ntBASIC14.15□□□□□ -0.14
Trim43cP86449 Gm27486-201ENSMUST00000184923 80 ntBASIC14.15□□□□□ -0.14
Trim43cP86449 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC14.15□□□□□ -0.14
Trim43cP86449 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Trim43cP86449 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim43cP86449 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim43cP86449 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trim43cP86449 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim43cP86449 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC14.15□□□□□ -0.14
Trim43cP86449 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim43cP86449 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim43cP86449 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Trim43cP86449 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Trim43cP86449 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.15
Trim43cP86449 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43cP86449 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43cP86449 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trim43cP86449 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43cP86449 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trim43cP86449 Gm8131-201ENSMUST00000213783 1570 ntBASIC14.14□□□□□ -0.15
Trim43cP86449 Zkscan3-207ENSMUST00000223831 2101 ntBASIC14.14□□□□□ -0.15
Trim43cP86449 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trim43cP86449 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43cP86449 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43cP86449 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43cP86449 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43cP86449 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43cP86449 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43cP86449 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43cP86449 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43cP86449 Gm11478-201ENSMUST00000117851 599 ntBASIC14.14□□□□□ -0.15
Trim43cP86449 Gm12390-201ENSMUST00000117897 397 ntBASIC14.14□□□□□ -0.15
Trim43cP86449 Gm22121-201ENSMUST00000175148 54 ntBASIC14.14□□□□□ -0.15
Trim43cP86449 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC14.14□□□□□ -0.15
Trim43cP86449 Gm6458-201ENSMUST00000211573 635 ntBASIC14.14□□□□□ -0.15
Trim43cP86449 Gm32025-201ENSMUST00000217960 307 ntBASIC14.14□□□□□ -0.15
Trim43cP86449 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC14.14□□□□□ -0.15
Trim43cP86449 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43cP86449 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43cP86449 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43cP86449 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43cP86449 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trim43cP86449 Gm10146-201ENSMUST00000072739 309 ntBASIC14.14□□□□□ -0.15
Trim43cP86449 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43cP86449 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trim43cP86449 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43cP86449 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC14.14□□□□□ -0.15
Trim43cP86449 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43cP86449 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43cP86449 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43cP86449 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43cP86449 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trim43cP86449 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43cP86449 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43cP86449 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Trim43cP86449 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43cP86449 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim43cP86449 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim43cP86449 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim43cP86449 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim43cP86449 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.13□□□□□ -0.15
Trim43cP86449 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim43cP86449 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim43cP86449 Zscan30-202ENSMUST00000224144 1458 ntBASIC14.13□□□□□ -0.15
Trim43cP86449 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim43cP86449 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim43cP86449 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC14.13□□□□□ -0.15
Trim43cP86449 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms