Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cux2P70298 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cux2P70298 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cux2P70298 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC20.86■□□□□ 0.93
Cux2P70298 Gm9072-201ENSMUST00000218390 1514 ntBASIC20.86■□□□□ 0.93
Cux2P70298 AC159649.2-201ENSMUST00000222984 3223 ntBASIC20.86■□□□□ 0.93
Cux2P70298 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cux2P70298 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Cux2P70298 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC20.86■□□□□ 0.93
Cux2P70298 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cux2P70298 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Cux2P70298 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC20.86■□□□□ 0.93
Cux2P70298 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Cux2P70298 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cux2P70298 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Cux2P70298 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cux2P70298 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Cux2P70298 Gm1848-201ENSMUST00000120711 789 ntBASIC20.86■□□□□ 0.93
Cux2P70298 Gm12516-201ENSMUST00000120819 385 ntBASIC20.86■□□□□ 0.93
Cux2P70298 Gm13937-201ENSMUST00000121000 988 ntBASIC20.86■□□□□ 0.93
Cux2P70298 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cux2P70298 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cux2P70298 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cux2P70298 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cux2P70298 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Cux2P70298 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cux2P70298 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cux2P70298 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Cux2P70298 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cux2P70298 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cux2P70298 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC20.85■□□□□ 0.93
Cux2P70298 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cux2P70298 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cux2P70298 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
Cux2P70298 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cux2P70298 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cux2P70298 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cux2P70298 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC20.85■□□□□ 0.93
Cux2P70298 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cux2P70298 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cux2P70298 Gm12857-201ENSMUST00000117678 592 ntBASIC20.85■□□□□ 0.93
Cux2P70298 Gm11956-201ENSMUST00000119525 512 ntBASIC20.85■□□□□ 0.93
Cux2P70298 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC20.85■□□□□ 0.93
Cux2P70298 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC20.85■□□□□ 0.93
Cux2P70298 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC20.85■□□□□ 0.93
Cux2P70298 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cux2P70298 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cux2P70298 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cux2P70298 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cux2P70298 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Cux2P70298 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Cux2P70298 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cux2P70298 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cux2P70298 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cux2P70298 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Cux2P70298 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Cux2P70298 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cux2P70298 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cux2P70298 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cux2P70298 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cux2P70298 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cux2P70298 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC20.84■□□□□ 0.93
Cux2P70298 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cux2P70298 Gm18159-201ENSMUST00000174516 1070 ntBASIC20.84■□□□□ 0.93
Cux2P70298 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Cux2P70298 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cux2P70298 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cux2P70298 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC20.84■□□□□ 0.93
Cux2P70298 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cux2P70298 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cux2P70298 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cux2P70298 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cux2P70298 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cux2P70298 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC20.83■□□□□ 0.93
Cux2P70298 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Cux2P70298 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cux2P70298 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cux2P70298 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cux2P70298 Gm18304-201ENSMUST00000189162 546 ntBASIC20.83■□□□□ 0.93
Cux2P70298 AC159376.1-201ENSMUST00000218504 630 ntBASIC20.83■□□□□ 0.93
Cux2P70298 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cux2P70298 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cux2P70298 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cux2P70298 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cux2P70298 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cux2P70298 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cux2P70298 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cux2P70298 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
Cux2P70298 Gm43134-201ENSMUST00000199434 1886 ntBASIC20.83■□□□□ 0.92
Cux2P70298 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cux2P70298 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Cux2P70298 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cux2P70298 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cux2P70298 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
Cux2P70298 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cux2P70298 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cux2P70298 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cux2P70298 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cux2P70298 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC20.82■□□□□ 0.92
Cux2P70298 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms