Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tpm1P58771 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tpm1P58771 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tpm1P58771 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC14.53□□□□□ -0.08
Tpm1P58771 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tpm1P58771 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tpm1P58771 CT009757.3-201ENSMUST00000223367 2320 ntBASIC14.53□□□□□ -0.08
Tpm1P58771 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tpm1P58771 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tpm1P58771 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Tpm1P58771 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tpm1P58771 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Tpm1P58771 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tpm1P58771 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Tpm1P58771 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.53□□□□□ -0.08
Tpm1P58771 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tpm1P58771 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tpm1P58771 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.53□□□□□ -0.08
Tpm1P58771 AC132467.2-202ENSMUST00000227726 559 ntBASIC14.53□□□□□ -0.08
Tpm1P58771 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tpm1P58771 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tpm1P58771 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Tpm1P58771 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Tpm1P58771 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tpm1P58771 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Tpm1P58771 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tpm1P58771 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tpm1P58771 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tpm1P58771 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Tpm1P58771 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tpm1P58771 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tpm1P58771 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Tpm1P58771 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tpm1P58771 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Tpm1P58771 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tpm1P58771 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tpm1P58771 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.52□□□□□ -0.08
Tpm1P58771 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tpm1P58771 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tpm1P58771 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tpm1P58771 Gm4995-201ENSMUST00000117247 432 ntBASIC14.52□□□□□ -0.09
Tpm1P58771 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.52□□□□□ -0.09
Tpm1P58771 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.52□□□□□ -0.09
Tpm1P58771 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
Tpm1P58771 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.52□□□□□ -0.09
Tpm1P58771 Gm5312-201ENSMUST00000203728 547 ntBASIC14.52□□□□□ -0.09
Tpm1P58771 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tpm1P58771 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.52□□□□□ -0.09
Tpm1P58771 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tpm1P58771 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tpm1P58771 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tpm1P58771 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tpm1P58771 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC14.52□□□□□ -0.09
Tpm1P58771 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tpm1P58771 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tpm1P58771 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tpm1P58771 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Tpm1P58771 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tpm1P58771 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Tpm1P58771 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tpm1P58771 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tpm1P58771 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC14.51□□□□□ -0.09
Tpm1P58771 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tpm1P58771 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tpm1P58771 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tpm1P58771 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tpm1P58771 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tpm1P58771 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Tpm1P58771 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Tpm1P58771 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC14.51□□□□□ -0.09
Tpm1P58771 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.51□□□□□ -0.09
Tpm1P58771 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.51□□□□□ -0.09
Tpm1P58771 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.51□□□□□ -0.09
Tpm1P58771 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.51□□□□□ -0.09
Tpm1P58771 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Tpm1P58771 Gm24513-201ENSMUST00000174964 138 ntBASIC14.51□□□□□ -0.09
Tpm1P58771 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC14.51□□□□□ -0.09
Tpm1P58771 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.51□□□□□ -0.09
Tpm1P58771 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.51□□□□□ -0.09
Tpm1P58771 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tpm1P58771 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tpm1P58771 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tpm1P58771 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tpm1P58771 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tpm1P58771 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tpm1P58771 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Tpm1P58771 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Tpm1P58771 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Tpm1P58771 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tpm1P58771 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC14.51□□□□□ -0.09
Tpm1P58771 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Tpm1P58771 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Tpm1P58771 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tpm1P58771 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tpm1P58771 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tpm1P58771 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Tpm1P58771 Gm5466-201ENSMUST00000119395 1890 ntBASIC14.5□□□□□ -0.09
Tpm1P58771 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Tpm1P58771 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Tpm1P58771 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms