Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lim2P56563 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lim2P56563 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lim2P56563 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lim2P56563 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Lim2P56563 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lim2P56563 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Lim2P56563 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Lim2P56563 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lim2P56563 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Lim2P56563 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lim2P56563 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.03□□□□□ -0.32
Lim2P56563 Gm13123-201ENSMUST00000122173 492 ntBASIC13.03□□□□□ -0.32
Lim2P56563 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC13.03□□□□□ -0.32
Lim2P56563 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Lim2P56563 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Lim2P56563 Gm37497-201ENSMUST00000195830 798 ntBASIC13.03□□□□□ -0.32
Lim2P56563 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.03□□□□□ -0.32
Lim2P56563 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.03□□□□□ -0.32
Lim2P56563 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.03□□□□□ -0.32
Lim2P56563 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lim2P56563 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lim2P56563 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Lim2P56563 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.03□□□□□ -0.32
Lim2P56563 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lim2P56563 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Lim2P56563 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lim2P56563 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.03□□□□□ -0.32
Lim2P56563 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Lim2P56563 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.03□□□□□ -0.32
Lim2P56563 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Lim2P56563 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Lim2P56563 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lim2P56563 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.03□□□□□ -0.32
Lim2P56563 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Lim2P56563 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lim2P56563 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lim2P56563 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lim2P56563 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lim2P56563 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.02□□□□□ -0.32
Lim2P56563 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lim2P56563 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Lim2P56563 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Lim2P56563 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lim2P56563 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.02□□□□□ -0.32
Lim2P56563 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Lim2P56563 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Lim2P56563 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Lim2P56563 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lim2P56563 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lim2P56563 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.02□□□□□ -0.33
Lim2P56563 Mir1982-201ENSMUST00000157368 74 ntBASIC13.02□□□□□ -0.33
Lim2P56563 Gm4271-201ENSMUST00000174444 973 ntBASIC13.02□□□□□ -0.33
Lim2P56563 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC13.02□□□□□ -0.33
Lim2P56563 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lim2P56563 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC13.02□□□□□ -0.33
Lim2P56563 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Lim2P56563 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lim2P56563 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lim2P56563 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Lim2P56563 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lim2P56563 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lim2P56563 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.02□□□□□ -0.33
Lim2P56563 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lim2P56563 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lim2P56563 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lim2P56563 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lim2P56563 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lim2P56563 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lim2P56563 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lim2P56563 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.02□□□□□ -0.33
Lim2P56563 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lim2P56563 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.02□□□□□ -0.33
Lim2P56563 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.02□□□□□ -0.33
Lim2P56563 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lim2P56563 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lim2P56563 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Lim2P56563 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lim2P56563 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lim2P56563 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lim2P56563 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Lim2P56563 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Lim2P56563 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lim2P56563 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lim2P56563 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lim2P56563 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lim2P56563 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Lim2P56563 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lim2P56563 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lim2P56563 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lim2P56563 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.01□□□□□ -0.33
Lim2P56563 Gm13226-201ENSMUST00000117838 404 ntBASIC13.01□□□□□ -0.33
Lim2P56563 Gm16177-201ENSMUST00000120728 718 ntBASIC13.01□□□□□ -0.33
Lim2P56563 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lim2P56563 Gm27731-201ENSMUST00000185192 107 ntBASIC13.01□□□□□ -0.33
Lim2P56563 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC13.01□□□□□ -0.33
Lim2P56563 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Lim2P56563 Gm43818-201ENSMUST00000200605 466 ntBASIC13.01□□□□□ -0.33
Lim2P56563 Gm40466-201ENSMUST00000212174 422 ntBASIC13.01□□□□□ -0.33
Lim2P56563 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms