Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.47□□□□□ -0.41
Cdkn2bP55271 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdkn2bP55271 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdkn2bP55271 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdkn2bP55271 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdkn2bP55271 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.47□□□□□ -0.41
Cdkn2bP55271 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdkn2bP55271 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Cdkn2bP55271 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdkn2bP55271 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Cdkn2bP55271 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdkn2bP55271 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdkn2bP55271 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdkn2bP55271 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdkn2bP55271 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdkn2bP55271 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Cdkn2bP55271 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdkn2bP55271 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdkn2bP55271 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdkn2bP55271 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdkn2bP55271 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Cdkn2bP55271 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdkn2bP55271 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Cdkn2bP55271 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cdkn2bP55271 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdkn2bP55271 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdkn2bP55271 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdkn2bP55271 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdkn2bP55271 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Cdkn2bP55271 Pck2-205ENSMUST00000226352 2784 ntBASIC12.46□□□□□ -0.41
Cdkn2bP55271 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdkn2bP55271 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdkn2bP55271 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Cdkn2bP55271 Mir686-201ENSMUST00000102174 109 ntBASIC12.46□□□□□ -0.41
Cdkn2bP55271 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdkn2bP55271 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdkn2bP55271 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdkn2bP55271 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.46□□□□□ -0.41
Cdkn2bP55271 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.46□□□□□ -0.41
Cdkn2bP55271 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdkn2bP55271 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cdkn2bP55271 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdkn2bP55271 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Cdkn2bP55271 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cdkn2bP55271 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cdkn2bP55271 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Cdkn2bP55271 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.42
Cdkn2bP55271 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cdkn2bP55271 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cdkn2bP55271 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cdkn2bP55271 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cdkn2bP55271 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Cdkn2bP55271 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdkn2bP55271 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdkn2bP55271 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdkn2bP55271 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdkn2bP55271 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdkn2bP55271 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
Cdkn2bP55271 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Cdkn2bP55271 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdkn2bP55271 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Cdkn2bP55271 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdkn2bP55271 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdkn2bP55271 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdkn2bP55271 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdkn2bP55271 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdkn2bP55271 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdkn2bP55271 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdkn2bP55271 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdkn2bP55271 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.45□□□□□ -0.42
Cdkn2bP55271 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.45□□□□□ -0.42
Cdkn2bP55271 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.45□□□□□ -0.42
Cdkn2bP55271 Gm12151-201ENSMUST00000121374 290 ntBASIC12.45□□□□□ -0.42
Cdkn2bP55271 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.45□□□□□ -0.42
Cdkn2bP55271 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.45□□□□□ -0.42
Cdkn2bP55271 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.45□□□□□ -0.42
Cdkn2bP55271 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC12.45□□□□□ -0.42
Cdkn2bP55271 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdkn2bP55271 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.45□□□□□ -0.42
Cdkn2bP55271 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdkn2bP55271 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdkn2bP55271 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdkn2bP55271 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.45□□□□□ -0.42
Cdkn2bP55271 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.45□□□□□ -0.42
Cdkn2bP55271 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdkn2bP55271 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdkn2bP55271 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdkn2bP55271 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdkn2bP55271 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdkn2bP55271 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdkn2bP55271 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cdkn2bP55271 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdkn2bP55271 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdkn2bP55271 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdkn2bP55271 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.44□□□□□ -0.42
Cdkn2bP55271 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Cdkn2bP55271 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdkn2bP55271 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Cdkn2bP55271 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdkn2bP55271 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms