Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Fdft1P53798 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Fdft1P53798 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Fdft1P53798 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Fdft1P53798 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.03□□□□□ -0.32
Fdft1P53798 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.03□□□□□ -0.32
Fdft1P53798 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Fdft1P53798 Mir7654-201ENSMUST00000185082 70 ntBASIC13.03□□□□□ -0.32
Fdft1P53798 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.03□□□□□ -0.32
Fdft1P53798 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Fdft1P53798 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC13.03□□□□□ -0.32
Fdft1P53798 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Fdft1P53798 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Fdft1P53798 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Fdft1P53798 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.03□□□□□ -0.32
Fdft1P53798 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.03□□□□□ -0.32
Fdft1P53798 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Fdft1P53798 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Fdft1P53798 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Fdft1P53798 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Fdft1P53798 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Fdft1P53798 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Fdft1P53798 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Fdft1P53798 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.03□□□□□ -0.32
Fdft1P53798 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Fdft1P53798 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Fdft1P53798 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Fdft1P53798 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Fdft1P53798 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Fdft1P53798 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Fdft1P53798 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
Fdft1P53798 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Fdft1P53798 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Fdft1P53798 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Fdft1P53798 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Fdft1P53798 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Fdft1P53798 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Fdft1P53798 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.02□□□□□ -0.33
Fdft1P53798 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.02□□□□□ -0.33
Fdft1P53798 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Fdft1P53798 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Fdft1P53798 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Fdft1P53798 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.02□□□□□ -0.33
Fdft1P53798 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Fdft1P53798 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Fdft1P53798 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.02□□□□□ -0.33
Fdft1P53798 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.02□□□□□ -0.33
Fdft1P53798 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Fdft1P53798 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Fdft1P53798 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Fdft1P53798 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.02□□□□□ -0.33
Fdft1P53798 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Fdft1P53798 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Fdft1P53798 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.02□□□□□ -0.33
Fdft1P53798 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Fdft1P53798 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Fdft1P53798 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Fdft1P53798 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Fdft1P53798 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fdft1P53798 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fdft1P53798 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fdft1P53798 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fdft1P53798 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Fdft1P53798 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fdft1P53798 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.01□□□□□ -0.33
Fdft1P53798 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fdft1P53798 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Fdft1P53798 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.01□□□□□ -0.33
Fdft1P53798 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fdft1P53798 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.01□□□□□ -0.33
Fdft1P53798 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fdft1P53798 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fdft1P53798 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Fdft1P53798 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Fdft1P53798 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.01□□□□□ -0.33
Fdft1P53798 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.01□□□□□ -0.33
Fdft1P53798 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Fdft1P53798 Gm6983-201ENSMUST00000214912 628 ntBASIC13.01□□□□□ -0.33
Fdft1P53798 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fdft1P53798 Gm15823-201ENSMUST00000064305 670 ntBASIC13.01□□□□□ -0.33
Fdft1P53798 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fdft1P53798 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.01□□□□□ -0.33
Fdft1P53798 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fdft1P53798 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.01□□□□□ -0.33
Fdft1P53798 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Fdft1P53798 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Fdft1P53798 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Fdft1P53798 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.01□□□□□ -0.33
Fdft1P53798 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fdft1P53798 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Fdft1P53798 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fdft1P53798 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Fdft1P53798 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Fdft1P53798 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fdft1P53798 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fdft1P53798 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fdft1P53798 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fdft1P53798 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fdft1P53798 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Fdft1P53798 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms