Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Shmt1P50431 Gm45880-201ENSMUST00000213041 853 ntBASIC13.77□□□□□ -0.21
Shmt1P50431 Gm17823-201ENSMUST00000217830 1006 ntBASIC13.77□□□□□ -0.21
Shmt1P50431 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.77□□□□□ -0.21
Shmt1P50431 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Shmt1P50431 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Shmt1P50431 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Shmt1P50431 Gm9823-201ENSMUST00000051212 327 ntBASIC13.77□□□□□ -0.21
Shmt1P50431 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Shmt1P50431 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Shmt1P50431 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Shmt1P50431 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Shmt1P50431 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Shmt1P50431 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Shmt1P50431 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Shmt1P50431 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Shmt1P50431 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.77□□□□□ -0.21
Shmt1P50431 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Shmt1P50431 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Shmt1P50431 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shmt1P50431 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Shmt1P50431 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shmt1P50431 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shmt1P50431 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shmt1P50431 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.76□□□□□ -0.21
Shmt1P50431 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.76□□□□□ -0.21
Shmt1P50431 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shmt1P50431 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.76□□□□□ -0.21
Shmt1P50431 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shmt1P50431 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shmt1P50431 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shmt1P50431 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shmt1P50431 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Shmt1P50431 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shmt1P50431 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.76□□□□□ -0.21
Shmt1P50431 Mir1247-201ENSMUST00000116706 82 ntBASIC13.76□□□□□ -0.21
Shmt1P50431 Gm5940-201ENSMUST00000117582 1068 ntBASIC13.76□□□□□ -0.21
Shmt1P50431 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC13.76□□□□□ -0.21
Shmt1P50431 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.76□□□□□ -0.21
Shmt1P50431 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Shmt1P50431 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Shmt1P50431 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC13.76□□□□□ -0.21
Shmt1P50431 Gm37008-201ENSMUST00000195712 319 ntBASIC13.76□□□□□ -0.21
Shmt1P50431 Gm19184-201ENSMUST00000196798 928 ntBASIC13.76□□□□□ -0.21
Shmt1P50431 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC13.76□□□□□ -0.21
Shmt1P50431 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.76□□□□□ -0.21
Shmt1P50431 Gm18054-201ENSMUST00000207539 555 ntBASIC13.76□□□□□ -0.21
Shmt1P50431 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Shmt1P50431 Gm19309-201ENSMUST00000218295 205 ntBASIC13.76□□□□□ -0.21
Shmt1P50431 Gm4935-201ENSMUST00000221316 1198 ntBASIC13.76□□□□□ -0.21
Shmt1P50431 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.76□□□□□ -0.21
Shmt1P50431 Gm7399-201ENSMUST00000032395 858 ntBASIC13.76□□□□□ -0.21
Shmt1P50431 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shmt1P50431 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.76□□□□□ -0.21
Shmt1P50431 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shmt1P50431 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.76□□□□□ -0.21
Shmt1P50431 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shmt1P50431 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Shmt1P50431 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
Shmt1P50431 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Shmt1P50431 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shmt1P50431 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Shmt1P50431 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.76□□□□□ -0.21
Shmt1P50431 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Shmt1P50431 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Shmt1P50431 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Shmt1P50431 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Shmt1P50431 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.75□□□□□ -0.21
Shmt1P50431 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.75□□□□□ -0.21
Shmt1P50431 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Shmt1P50431 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.75□□□□□ -0.21
Shmt1P50431 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.75□□□□□ -0.21
Shmt1P50431 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Shmt1P50431 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.75□□□□□ -0.21
Shmt1P50431 Gm14704-201ENSMUST00000120300 874 ntBASIC13.75□□□□□ -0.21
Shmt1P50431 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC13.75□□□□□ -0.21
Shmt1P50431 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC13.75□□□□□ -0.21
Shmt1P50431 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC13.75□□□□□ -0.21
Shmt1P50431 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC13.75□□□□□ -0.21
Shmt1P50431 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC13.75□□□□□ -0.21
Shmt1P50431 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Shmt1P50431 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.75□□□□□ -0.21
Shmt1P50431 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.75□□□□□ -0.21
Shmt1P50431 CU024892.2-201ENSMUST00000224608 832 ntBASIC13.75□□□□□ -0.21
Shmt1P50431 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Shmt1P50431 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Shmt1P50431 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Shmt1P50431 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Shmt1P50431 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Shmt1P50431 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.75□□□□□ -0.21
Shmt1P50431 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Shmt1P50431 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Shmt1P50431 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.75□□□□□ -0.21
Shmt1P50431 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Shmt1P50431 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Shmt1P50431 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Shmt1P50431 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Shmt1P50431 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Shmt1P50431 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Shmt1P50431 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms