Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
GdnfP48540 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
GdnfP48540 Gm15321-201ENSMUST00000121290 288 ntBASIC11.44□□□□□ -0.58
GdnfP48540 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC11.44□□□□□ -0.58
GdnfP48540 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC11.44□□□□□ -0.58
GdnfP48540 Wdyhv1-203ENSMUST00000226889 394 ntBASIC11.44□□□□□ -0.58
GdnfP48540 Gm20445-201ENSMUST00000061905 565 ntBASIC11.44□□□□□ -0.58
GdnfP48540 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
GdnfP48540 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
GdnfP48540 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
GdnfP48540 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
GdnfP48540 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.44□□□□□ -0.58
GdnfP48540 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
GdnfP48540 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
GdnfP48540 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
GdnfP48540 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
GdnfP48540 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
GdnfP48540 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
GdnfP48540 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
GdnfP48540 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
GdnfP48540 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
GdnfP48540 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
GdnfP48540 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
GdnfP48540 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
GdnfP48540 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
GdnfP48540 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.43□□□□□ -0.58
GdnfP48540 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
GdnfP48540 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
GdnfP48540 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
GdnfP48540 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
GdnfP48540 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
GdnfP48540 Syt7-204ENSMUST00000223586 1344 ntBASIC11.43□□□□□ -0.58
GdnfP48540 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
GdnfP48540 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
GdnfP48540 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
GdnfP48540 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
GdnfP48540 Mir698-201ENSMUST00000102164 109 ntBASIC11.43□□□□□ -0.58
GdnfP48540 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
GdnfP48540 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
GdnfP48540 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
GdnfP48540 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC11.43□□□□□ -0.58
GdnfP48540 Gm14057-201ENSMUST00000120631 482 ntBASIC11.43□□□□□ -0.58
GdnfP48540 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC11.43□□□□□ -0.58
GdnfP48540 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC11.43□□□□□ -0.58
GdnfP48540 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC11.43□□□□□ -0.58
GdnfP48540 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
GdnfP48540 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
GdnfP48540 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
GdnfP48540 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC11.43□□□□□ -0.58
GdnfP48540 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
GdnfP48540 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
GdnfP48540 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
GdnfP48540 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
GdnfP48540 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
GdnfP48540 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
GdnfP48540 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
GdnfP48540 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
GdnfP48540 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
GdnfP48540 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
GdnfP48540 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
GdnfP48540 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
GdnfP48540 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
GdnfP48540 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
GdnfP48540 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.43□□□□□ -0.58
GdnfP48540 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
GdnfP48540 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
GdnfP48540 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
GdnfP48540 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
GdnfP48540 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
GdnfP48540 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
GdnfP48540 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
GdnfP48540 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
GdnfP48540 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.43□□□□□ -0.58
GdnfP48540 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
GdnfP48540 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
GdnfP48540 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
GdnfP48540 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
GdnfP48540 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
GdnfP48540 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
GdnfP48540 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
GdnfP48540 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
GdnfP48540 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
GdnfP48540 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.42□□□□□ -0.58
GdnfP48540 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
GdnfP48540 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
GdnfP48540 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.42□□□□□ -0.58
GdnfP48540 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.42□□□□□ -0.58
GdnfP48540 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
GdnfP48540 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
GdnfP48540 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
GdnfP48540 Gm15240-201ENSMUST00000118156 720 ntBASIC11.42□□□□□ -0.58
GdnfP48540 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
GdnfP48540 Gm21854-201ENSMUST00000179901 471 ntBASIC11.42□□□□□ -0.58
GdnfP48540 Gm24694-201ENSMUST00000180054 110 ntBASIC11.42□□□□□ -0.58
GdnfP48540 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
GdnfP48540 Gm27663-201ENSMUST00000184839 110 ntBASIC11.42□□□□□ -0.58
GdnfP48540 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
GdnfP48540 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
GdnfP48540 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC11.42□□□□□ -0.58
GdnfP48540 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms