Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Prox1P48437 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.53□□□□□ -0.4
Prox1P48437 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Prox1P48437 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Prox1P48437 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Prox1P48437 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Prox1P48437 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Prox1P48437 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Prox1P48437 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Prox1P48437 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Prox1P48437 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Prox1P48437 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Prox1P48437 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Prox1P48437 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Prox1P48437 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Prox1P48437 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.52□□□□□ -0.4
Prox1P48437 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.52□□□□□ -0.4
Prox1P48437 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Prox1P48437 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Prox1P48437 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Prox1P48437 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
Prox1P48437 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.52□□□□□ -0.41
Prox1P48437 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Prox1P48437 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Prox1P48437 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Prox1P48437 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.52□□□□□ -0.41
Prox1P48437 Gm15678-201ENSMUST00000117573 960 ntBASIC12.52□□□□□ -0.41
Prox1P48437 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.52□□□□□ -0.41
Prox1P48437 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Prox1P48437 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Prox1P48437 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.52□□□□□ -0.41
Prox1P48437 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC12.52□□□□□ -0.41
Prox1P48437 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Prox1P48437 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Prox1P48437 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Prox1P48437 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Prox1P48437 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Prox1P48437 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Prox1P48437 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Prox1P48437 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.52□□□□□ -0.41
Prox1P48437 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Prox1P48437 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Prox1P48437 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.52□□□□□ -0.41
Prox1P48437 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Prox1P48437 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Prox1P48437 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Prox1P48437 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Prox1P48437 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Prox1P48437 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Prox1P48437 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Prox1P48437 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Prox1P48437 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Prox1P48437 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Prox1P48437 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Prox1P48437 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Prox1P48437 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Prox1P48437 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Prox1P48437 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.51□□□□□ -0.41
Prox1P48437 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Prox1P48437 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Prox1P48437 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Prox1P48437 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Prox1P48437 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Prox1P48437 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Prox1P48437 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Prox1P48437 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Prox1P48437 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Prox1P48437 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Prox1P48437 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC12.51□□□□□ -0.41
Prox1P48437 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Prox1P48437 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.51□□□□□ -0.41
Prox1P48437 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Prox1P48437 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Prox1P48437 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Prox1P48437 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Prox1P48437 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Prox1P48437 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.51□□□□□ -0.41
Prox1P48437 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Prox1P48437 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Prox1P48437 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Prox1P48437 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Prox1P48437 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Prox1P48437 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Prox1P48437 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Prox1P48437 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Prox1P48437 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Prox1P48437 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Prox1P48437 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Prox1P48437 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Prox1P48437 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Prox1P48437 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Prox1P48437 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.51□□□□□ -0.41
Prox1P48437 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Prox1P48437 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Prox1P48437 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Prox1P48437 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Prox1P48437 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Prox1P48437 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Prox1P48437 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Prox1P48437 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms