Protein–RNA interactions for Protein: P48030

Tgfa, Protransforming growth factor alpha, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TgfaP48030 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
TgfaP48030 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
TgfaP48030 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC11.3□□□□□ -0.6
TgfaP48030 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TgfaP48030 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
TgfaP48030 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.3□□□□□ -0.6
TgfaP48030 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
TgfaP48030 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
TgfaP48030 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TgfaP48030 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
TgfaP48030 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
TgfaP48030 AC159649.2-201ENSMUST00000222984 3223 ntBASIC11.3□□□□□ -0.6
TgfaP48030 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC11.3□□□□□ -0.6
TgfaP48030 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC11.29□□□□□ -0.6
TgfaP48030 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
TgfaP48030 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TgfaP48030 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
TgfaP48030 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TgfaP48030 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TgfaP48030 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TgfaP48030 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TgfaP48030 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TgfaP48030 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TgfaP48030 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
TgfaP48030 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TgfaP48030 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TgfaP48030 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC11.29□□□□□ -0.6
TgfaP48030 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TgfaP48030 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.29□□□□□ -0.6
TgfaP48030 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC11.29□□□□□ -0.6
TgfaP48030 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
TgfaP48030 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.29□□□□□ -0.6
TgfaP48030 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.29□□□□□ -0.6
TgfaP48030 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
TgfaP48030 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.29□□□□□ -0.6
TgfaP48030 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
TgfaP48030 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.29□□□□□ -0.6
TgfaP48030 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.29□□□□□ -0.6
TgfaP48030 Gm44651-201ENSMUST00000207343 372 ntBASIC11.29□□□□□ -0.6
TgfaP48030 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TgfaP48030 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TgfaP48030 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TgfaP48030 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TgfaP48030 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TgfaP48030 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TgfaP48030 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TgfaP48030 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.29□□□□□ -0.6
TgfaP48030 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TgfaP48030 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.29□□□□□ -0.6
TgfaP48030 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TgfaP48030 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TgfaP48030 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TgfaP48030 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
TgfaP48030 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TgfaP48030 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.29□□□□□ -0.6
TgfaP48030 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
TgfaP48030 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
TgfaP48030 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TgfaP48030 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TgfaP48030 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
TgfaP48030 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
TgfaP48030 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
TgfaP48030 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TgfaP48030 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
TgfaP48030 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
TgfaP48030 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
TgfaP48030 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
TgfaP48030 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TgfaP48030 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
TgfaP48030 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
TgfaP48030 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
TgfaP48030 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TgfaP48030 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TgfaP48030 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.28□□□□□ -0.6
TgfaP48030 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
TgfaP48030 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TgfaP48030 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
TgfaP48030 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TgfaP48030 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TgfaP48030 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TgfaP48030 Gm14704-201ENSMUST00000120300 874 ntBASIC11.28□□□□□ -0.6
TgfaP48030 Gm9083-201ENSMUST00000120423 819 ntBASIC11.28□□□□□ -0.6
TgfaP48030 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC11.28□□□□□ -0.6
TgfaP48030 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
TgfaP48030 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TgfaP48030 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TgfaP48030 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TgfaP48030 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TgfaP48030 Gm25700-201ENSMUST00000177693 110 ntBASIC11.28□□□□□ -0.6
TgfaP48030 Gm5523-201ENSMUST00000180415 997 ntBASIC11.28□□□□□ -0.6
TgfaP48030 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.28□□□□□ -0.6
TgfaP48030 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TgfaP48030 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.28□□□□□ -0.6
TgfaP48030 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TgfaP48030 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TgfaP48030 Gm22058-201ENSMUST00000083393 310 ntBASIC11.28□□□□□ -0.6
TgfaP48030 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
TgfaP48030 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TgfaP48030 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
TgfaP48030 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms