Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HttP42859 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
HttP42859 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HttP42859 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HttP42859 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HttP42859 Gm9645-201ENSMUST00000197131 792 ntBASIC13.45□□□□□ -0.26
HttP42859 Gm2965-201ENSMUST00000198365 343 ntBASIC13.45□□□□□ -0.26
HttP42859 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC13.45□□□□□ -0.26
HttP42859 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC13.45□□□□□ -0.26
HttP42859 AC134860.1-201ENSMUST00000224867 660 ntBASIC13.45□□□□□ -0.26
HttP42859 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HttP42859 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HttP42859 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HttP42859 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC13.45□□□□□ -0.26
HttP42859 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HttP42859 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HttP42859 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
HttP42859 Gm25063-201ENSMUST00000104666 94 ntBASIC13.44□□□□□ -0.26
HttP42859 Gm12857-201ENSMUST00000117678 592 ntBASIC13.44□□□□□ -0.26
HttP42859 Gm9166-201ENSMUST00000120293 561 ntBASIC13.44□□□□□ -0.26
HttP42859 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HttP42859 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HttP42859 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HttP42859 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HttP42859 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC13.44□□□□□ -0.26
HttP42859 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
HttP42859 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
HttP42859 Gm17213-201ENSMUST00000165161 1360 ntBASIC13.44□□□□□ -0.26
HttP42859 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
HttP42859 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HttP42859 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HttP42859 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
HttP42859 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.44□□□□□ -0.26
HttP42859 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
HttP42859 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC13.44□□□□□ -0.26
HttP42859 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
HttP42859 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HttP42859 Gm42433-201ENSMUST00000196806 940 ntBASIC13.44□□□□□ -0.26
HttP42859 Gm43184-201ENSMUST00000197247 542 ntBASIC13.44□□□□□ -0.26
HttP42859 Gm44421-201ENSMUST00000205064 1221 ntBASIC13.44□□□□□ -0.26
HttP42859 Gm2875-201ENSMUST00000211333 360 ntBASIC13.44□□□□□ -0.26
HttP42859 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC13.44□□□□□ -0.26
HttP42859 AC124433.1-201ENSMUST00000224483 1063 ntBASIC13.44□□□□□ -0.26
HttP42859 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
HttP42859 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC13.44□□□□□ -0.26
HttP42859 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
HttP42859 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
HttP42859 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HttP42859 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
HttP42859 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
HttP42859 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
HttP42859 Gm14034-201ENSMUST00000120147 551 ntBASIC13.44□□□□□ -0.26
HttP42859 Gng5-ps-201ENSMUST00000120931 205 ntBASIC13.44□□□□□ -0.26
HttP42859 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC13.44□□□□□ -0.26
HttP42859 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC13.44□□□□□ -0.26
HttP42859 AC154252.2-201ENSMUST00000223593 767 ntBASIC13.44□□□□□ -0.26
HttP42859 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
HttP42859 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
HttP42859 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
HttP42859 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
HttP42859 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
HttP42859 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
HttP42859 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HttP42859 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HttP42859 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
HttP42859 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
HttP42859 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
HttP42859 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
HttP42859 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
HttP42859 Ighv1-48-201ENSMUST00000191795 294 ntBASIC13.43□□□□□ -0.26
HttP42859 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
HttP42859 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC13.43□□□□□ -0.26
HttP42859 Gm35713-201ENSMUST00000210516 199 ntBASIC13.43□□□□□ -0.26
HttP42859 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
HttP42859 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC13.43□□□□□ -0.26
HttP42859 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC13.43□□□□□ -0.26
HttP42859 AC154257.1-202ENSMUST00000224729 843 ntBASIC13.43□□□□□ -0.26
HttP42859 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
HttP42859 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
HttP42859 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HttP42859 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
HttP42859 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
HttP42859 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.43□□□□□ -0.26
HttP42859 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC13.43□□□□□ -0.26
HttP42859 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC13.43□□□□□ -0.26
HttP42859 Gm18968-201ENSMUST00000221319 862 ntBASIC13.43□□□□□ -0.26
HttP42859 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC13.43□□□□□ -0.26
HttP42859 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
HttP42859 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HttP42859 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HttP42859 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HttP42859 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
HttP42859 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
HttP42859 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.42□□□□□ -0.26
HttP42859 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.42□□□□□ -0.26
HttP42859 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
HttP42859 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
HttP42859 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HttP42859 Gm7985-201ENSMUST00000183329 981 ntBASIC13.42□□□□□ -0.26
HttP42859 AC164087.2-201ENSMUST00000216206 1072 ntBASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms