Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Gm10729-202ENSMUST00000193403 1375 ntBASIC10.93□□□□□ -0.66
Hmx3P42581 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hmx3P42581 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hmx3P42581 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC10.93□□□□□ -0.66
Hmx3P42581 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hmx3P42581 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Hmx3P42581 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
Hmx3P42581 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hmx3P42581 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC10.93□□□□□ -0.66
Hmx3P42581 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hmx3P42581 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hmx3P42581 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Hmx3P42581 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Hmx3P42581 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Hmx3P42581 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hmx3P42581 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC10.93□□□□□ -0.66
Hmx3P42581 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC10.93□□□□□ -0.66
Hmx3P42581 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC10.93□□□□□ -0.66
Hmx3P42581 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hmx3P42581 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hmx3P42581 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hmx3P42581 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Hmx3P42581 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hmx3P42581 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hmx3P42581 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hmx3P42581 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hmx3P42581 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hmx3P42581 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hmx3P42581 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC10.93□□□□□ -0.66
Hmx3P42581 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hmx3P42581 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hmx3P42581 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hmx3P42581 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Hmx3P42581 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Hmx3P42581 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hmx3P42581 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hmx3P42581 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Hmx3P42581 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC10.93□□□□□ -0.66
Hmx3P42581 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hmx3P42581 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC10.93□□□□□ -0.66
Hmx3P42581 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Hmx3P42581 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hmx3P42581 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hmx3P42581 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Hmx3P42581 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Hmx3P42581 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hmx3P42581 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Hmx3P42581 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
Hmx3P42581 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC10.92□□□□□ -0.66
Hmx3P42581 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Hmx3P42581 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hmx3P42581 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hmx3P42581 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Hmx3P42581 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Hmx3P42581 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Hmx3P42581 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hmx3P42581 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hmx3P42581 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC10.92□□□□□ -0.66
Hmx3P42581 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC10.92□□□□□ -0.66
Hmx3P42581 Gm24543-201ENSMUST00000103867 82 ntBASIC10.92□□□□□ -0.66
Hmx3P42581 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Hmx3P42581 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hmx3P42581 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hmx3P42581 Gm14701-201ENSMUST00000117156 348 ntBASIC10.92□□□□□ -0.66
Hmx3P42581 Mir1897-201ENSMUST00000122581 272 ntBASIC10.92□□□□□ -0.66
Hmx3P42581 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Hmx3P42581 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC10.92□□□□□ -0.66
Hmx3P42581 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC10.92□□□□□ -0.66
Hmx3P42581 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Hmx3P42581 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC10.92□□□□□ -0.66
Hmx3P42581 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC10.92□□□□□ -0.66
Hmx3P42581 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hmx3P42581 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Hmx3P42581 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC10.92□□□□□ -0.66
Hmx3P42581 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hmx3P42581 Gm18027-201ENSMUST00000218947 619 ntBASIC10.92□□□□□ -0.66
Hmx3P42581 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Hmx3P42581 AC121804.3-201ENSMUST00000223420 295 ntBASIC10.92□□□□□ -0.66
Hmx3P42581 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hmx3P42581 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hmx3P42581 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Hmx3P42581 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hmx3P42581 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Hmx3P42581 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hmx3P42581 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Hmx3P42581 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC10.92□□□□□ -0.66
Hmx3P42581 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hmx3P42581 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Hmx3P42581 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hmx3P42581 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hmx3P42581 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC10.92□□□□□ -0.66
Hmx3P42581 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Hmx3P42581 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hmx3P42581 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Hmx3P42581 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hmx3P42581 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hmx3P42581 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hmx3P42581 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Hmx3P42581 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hmx3P42581 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms