Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cd9P40240 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cd9P40240 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cd9P40240 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.85□□□□□ -0.35
Cd9P40240 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cd9P40240 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cd9P40240 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cd9P40240 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cd9P40240 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cd9P40240 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cd9P40240 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Cd9P40240 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cd9P40240 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cd9P40240 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cd9P40240 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.84□□□□□ -0.35
Cd9P40240 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cd9P40240 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cd9P40240 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cd9P40240 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cd9P40240 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Cd9P40240 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cd9P40240 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cd9P40240 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cd9P40240 Snord83b-201ENSMUST00000104546 94 ntBASIC12.84□□□□□ -0.35
Cd9P40240 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cd9P40240 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.84□□□□□ -0.35
Cd9P40240 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.84□□□□□ -0.35
Cd9P40240 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cd9P40240 Gm4271-201ENSMUST00000174444 973 ntBASIC12.84□□□□□ -0.35
Cd9P40240 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cd9P40240 Gm27331-201ENSMUST00000183705 60 ntBASIC12.84□□□□□ -0.35
Cd9P40240 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.84□□□□□ -0.35
Cd9P40240 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.84□□□□□ -0.35
Cd9P40240 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.84□□□□□ -0.35
Cd9P40240 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cd9P40240 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cd9P40240 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Cd9P40240 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cd9P40240 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cd9P40240 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cd9P40240 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cd9P40240 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.84□□□□□ -0.35
Cd9P40240 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cd9P40240 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cd9P40240 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.84□□□□□ -0.35
Cd9P40240 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cd9P40240 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.84□□□□□ -0.35
Cd9P40240 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cd9P40240 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cd9P40240 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.84□□□□□ -0.35
Cd9P40240 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cd9P40240 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.83□□□□□ -0.35
Cd9P40240 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cd9P40240 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Cd9P40240 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Cd9P40240 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd9P40240 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cd9P40240 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Cd9P40240 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Cd9P40240 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd9P40240 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd9P40240 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Cd9P40240 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd9P40240 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd9P40240 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd9P40240 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd9P40240 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Cd9P40240 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Cd9P40240 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd9P40240 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.83□□□□□ -0.36
Cd9P40240 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.83□□□□□ -0.36
Cd9P40240 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cd9P40240 Gm24644-201ENSMUST00000157114 139 ntBASIC12.83□□□□□ -0.36
Cd9P40240 Gm22331-201ENSMUST00000158066 136 ntBASIC12.83□□□□□ -0.36
Cd9P40240 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd9P40240 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.83□□□□□ -0.36
Cd9P40240 Gm7561-201ENSMUST00000211203 886 ntBASIC12.83□□□□□ -0.36
Cd9P40240 Gm5035-201ENSMUST00000215581 927 ntBASIC12.83□□□□□ -0.36
Cd9P40240 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd9P40240 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Cd9P40240 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.83□□□□□ -0.36
Cd9P40240 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd9P40240 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd9P40240 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd9P40240 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd9P40240 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd9P40240 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd9P40240 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd9P40240 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.83□□□□□ -0.36
Cd9P40240 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd9P40240 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.83□□□□□ -0.36
Cd9P40240 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd9P40240 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd9P40240 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Cd9P40240 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd9P40240 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Cd9P40240 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cd9P40240 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Cd9P40240 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cd9P40240 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms