Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm23949-201ENSMUST00000104027 127 ntBASIC13.33□□□□□ -0.28
Cxcl12P40224 Gm12165-201ENSMUST00000117047 342 ntBASIC13.33□□□□□ -0.28
Cxcl12P40224 Gm15711-201ENSMUST00000118889 535 ntBASIC13.33□□□□□ -0.28
Cxcl12P40224 Gm13045-201ENSMUST00000119019 712 ntBASIC13.33□□□□□ -0.28
Cxcl12P40224 Gm14832-201ENSMUST00000121289 322 ntBASIC13.33□□□□□ -0.28
Cxcl12P40224 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcl12P40224 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcl12P40224 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcl12P40224 Gm5778-201ENSMUST00000171003 1072 ntBASIC13.33□□□□□ -0.28
Cxcl12P40224 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
Cxcl12P40224 Gm6652-201ENSMUST00000186414 1070 ntBASIC13.33□□□□□ -0.28
Cxcl12P40224 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcl12P40224 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC13.33□□□□□ -0.28
Cxcl12P40224 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC13.33□□□□□ -0.28
Cxcl12P40224 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC13.33□□□□□ -0.28
Cxcl12P40224 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcl12P40224 Gm10752-201ENSMUST00000218348 729 ntBASIC13.33□□□□□ -0.28
Cxcl12P40224 CT025551.1-201ENSMUST00000223996 692 ntBASIC13.33□□□□□ -0.28
Cxcl12P40224 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcl12P40224 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcl12P40224 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcl12P40224 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Cxcl12P40224 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcl12P40224 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcl12P40224 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Cxcl12P40224 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcl12P40224 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Cxcl12P40224 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.33□□□□□ -0.28
Cxcl12P40224 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC13.33□□□□□ -0.28
Cxcl12P40224 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcl12P40224 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC13.33□□□□□ -0.28
Cxcl12P40224 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcl12P40224 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcl12P40224 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl12P40224 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl12P40224 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl12P40224 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Cxcl12P40224 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl12P40224 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl12P40224 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl12P40224 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.32□□□□□ -0.28
Cxcl12P40224 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl12P40224 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl12P40224 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl12P40224 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC13.32□□□□□ -0.28
Cxcl12P40224 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl12P40224 Gm12380-201ENSMUST00000119012 544 ntBASIC13.32□□□□□ -0.28
Cxcl12P40224 Gm24845-201ENSMUST00000158034 109 ntBASIC13.32□□□□□ -0.28
Cxcl12P40224 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.32□□□□□ -0.28
Cxcl12P40224 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC13.32□□□□□ -0.28
Cxcl12P40224 Gm8018-201ENSMUST00000173536 789 ntBASIC13.32□□□□□ -0.28
Cxcl12P40224 Mir6958-201ENSMUST00000184207 73 ntBASIC13.32□□□□□ -0.28
Cxcl12P40224 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl12P40224 Gm9540-201ENSMUST00000188230 478 ntBASIC13.32□□□□□ -0.28
Cxcl12P40224 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.32□□□□□ -0.28
Cxcl12P40224 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl12P40224 AY036118-201ENSMUST00000200021 923 ntBASIC13.32□□□□□ -0.28
Cxcl12P40224 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC13.32□□□□□ -0.28
Cxcl12P40224 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC13.32□□□□□ -0.28
Cxcl12P40224 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Cxcl12P40224 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl12P40224 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl12P40224 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl12P40224 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.32□□□□□ -0.28
Cxcl12P40224 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl12P40224 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.32□□□□□ -0.28
Cxcl12P40224 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl12P40224 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Cxcl12P40224 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl12P40224 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl12P40224 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl12P40224 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.32□□□□□ -0.28
Cxcl12P40224 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl12P40224 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcl12P40224 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Cxcl12P40224 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcl12P40224 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcl12P40224 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcl12P40224 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcl12P40224 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcl12P40224 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcl12P40224 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcl12P40224 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcl12P40224 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.31□□□□□ -0.28
Cxcl12P40224 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Cxcl12P40224 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcl12P40224 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC13.31□□□□□ -0.28
Cxcl12P40224 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC13.31□□□□□ -0.28
Cxcl12P40224 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC13.31□□□□□ -0.28
Cxcl12P40224 Gm6039-201ENSMUST00000121667 1250 ntBASIC13.31□□□□□ -0.28
Cxcl12P40224 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcl12P40224 Gm10051-201ENSMUST00000145209 414 ntBASIC13.31□□□□□ -0.28
Cxcl12P40224 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC13.31□□□□□ -0.28
Cxcl12P40224 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC13.31□□□□□ -0.28
Cxcl12P40224 Gm28882-201ENSMUST00000185504 314 ntBASIC13.31□□□□□ -0.28
Cxcl12P40224 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC13.31□□□□□ -0.28
Cxcl12P40224 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcl12P40224 Gm19187-201ENSMUST00000206781 892 ntBASIC13.31□□□□□ -0.28
Cxcl12P40224 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC13.31□□□□□ -0.28
Cxcl12P40224 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms