Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Gm17794-201ENSMUST00000220252 955 ntBASIC11.42□□□□□ -0.58
Upk2P38575 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC11.42□□□□□ -0.58
Upk2P38575 AC110817.1-201ENSMUST00000225706 605 ntBASIC11.42□□□□□ -0.58
Upk2P38575 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Upk2P38575 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Upk2P38575 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upk2P38575 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upk2P38575 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upk2P38575 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Upk2P38575 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.42□□□□□ -0.58
Upk2P38575 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Upk2P38575 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upk2P38575 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Upk2P38575 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upk2P38575 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.42□□□□□ -0.58
Upk2P38575 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upk2P38575 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Upk2P38575 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upk2P38575 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upk2P38575 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Upk2P38575 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.42□□□□□ -0.58
Upk2P38575 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Upk2P38575 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Upk2P38575 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Upk2P38575 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk2P38575 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk2P38575 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Upk2P38575 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk2P38575 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk2P38575 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Upk2P38575 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk2P38575 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk2P38575 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Upk2P38575 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk2P38575 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk2P38575 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk2P38575 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk2P38575 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.41□□□□□ -0.58
Upk2P38575 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Upk2P38575 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk2P38575 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk2P38575 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Upk2P38575 Gm12960-201ENSMUST00000120017 1066 ntBASIC11.41□□□□□ -0.58
Upk2P38575 Gm12539-201ENSMUST00000121549 1098 ntBASIC11.41□□□□□ -0.58
Upk2P38575 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.41□□□□□ -0.58
Upk2P38575 Mir1894-201ENSMUST00000122802 81 ntBASIC11.41□□□□□ -0.58
Upk2P38575 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC11.41□□□□□ -0.58
Upk2P38575 Gm6244-201ENSMUST00000178732 841 ntBASIC11.41□□□□□ -0.58
Upk2P38575 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC11.41□□□□□ -0.58
Upk2P38575 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC11.41□□□□□ -0.58
Upk2P38575 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC11.41□□□□□ -0.58
Upk2P38575 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC11.41□□□□□ -0.58
Upk2P38575 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Upk2P38575 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk2P38575 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.41□□□□□ -0.58
Upk2P38575 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.41□□□□□ -0.58
Upk2P38575 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk2P38575 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk2P38575 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Upk2P38575 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk2P38575 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk2P38575 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk2P38575 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk2P38575 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk2P38575 Ntrk2-208ENSMUST00000225583 2719 ntBASIC11.41□□□□□ -0.58
Upk2P38575 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk2P38575 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Upk2P38575 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk2P38575 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk2P38575 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk2P38575 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk2P38575 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk2P38575 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Upk2P38575 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.41□□□□□ -0.58
Upk2P38575 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.4□□□□□ -0.58
Upk2P38575 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Upk2P38575 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.4□□□□□ -0.58
Upk2P38575 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Upk2P38575 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Upk2P38575 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Upk2P38575 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC11.4□□□□□ -0.58
Upk2P38575 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Upk2P38575 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC11.4□□□□□ -0.58
Upk2P38575 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Upk2P38575 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Upk2P38575 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Upk2P38575 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Upk2P38575 Gm9002-201ENSMUST00000178437 499 ntBASIC11.4□□□□□ -0.58
Upk2P38575 Gm9794-201ENSMUST00000202370 423 ntBASIC11.4□□□□□ -0.58
Upk2P38575 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Upk2P38575 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Upk2P38575 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Upk2P38575 Gm5356-201ENSMUST00000093326 615 ntBASIC11.4□□□□□ -0.58
Upk2P38575 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.4□□□□□ -0.58
Upk2P38575 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.4□□□□□ -0.58
Upk2P38575 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Upk2P38575 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC11.4□□□□□ -0.58
Upk2P38575 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Upk2P38575 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.4□□□□□ -0.58
Upk2P38575 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms