Protein–RNA interactions for Protein: P37913

Lig1, DNA ligase 1, mousemouse

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1P37913 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Lig1P37913 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.81□□□□□ -0.04
Lig1P37913 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Lig1P37913 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Lig1P37913 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lig1P37913 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lig1P37913 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Lig1P37913 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Lig1P37913 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Lig1P37913 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lig1P37913 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC14.81□□□□□ -0.04
Lig1P37913 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Lig1P37913 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Lig1P37913 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Lig1P37913 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lig1P37913 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lig1P37913 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lig1P37913 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lig1P37913 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Lig1P37913 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lig1P37913 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lig1P37913 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC14.8□□□□□ -0.04
Lig1P37913 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lig1P37913 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lig1P37913 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC14.8□□□□□ -0.04
Lig1P37913 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC14.8□□□□□ -0.04
Lig1P37913 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Lig1P37913 Mir3102-201ENSMUST00000175555 104 ntBASIC14.8□□□□□ -0.04
Lig1P37913 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Lig1P37913 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Lig1P37913 Gm6082-201ENSMUST00000215204 454 ntBASIC14.8□□□□□ -0.04
Lig1P37913 Gm32025-201ENSMUST00000217960 307 ntBASIC14.8□□□□□ -0.04
Lig1P37913 AC122371.3-201ENSMUST00000223402 1061 ntBASIC14.8□□□□□ -0.04
Lig1P37913 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lig1P37913 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lig1P37913 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lig1P37913 Mir433-201ENSMUST00000093564 124 ntBASIC14.8□□□□□ -0.04
Lig1P37913 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lig1P37913 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lig1P37913 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Lig1P37913 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lig1P37913 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lig1P37913 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lig1P37913 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lig1P37913 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lig1P37913 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Lig1P37913 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Lig1P37913 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Lig1P37913 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Lig1P37913 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Lig1P37913 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lig1P37913 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lig1P37913 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC14.79□□□□□ -0.04
Lig1P37913 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lig1P37913 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Lig1P37913 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Lig1P37913 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
Lig1P37913 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Lig1P37913 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lig1P37913 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Lig1P37913 Gm17376-201ENSMUST00000166016 84 ntBASIC14.79□□□□□ -0.04
Lig1P37913 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC14.79□□□□□ -0.04
Lig1P37913 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC14.79□□□□□ -0.04
Lig1P37913 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Lig1P37913 Gm22121-201ENSMUST00000175148 54 ntBASIC14.79□□□□□ -0.04
Lig1P37913 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Lig1P37913 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Lig1P37913 Gm18827-201ENSMUST00000188341 790 ntBASIC14.79□□□□□ -0.04
Lig1P37913 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Lig1P37913 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC14.79□□□□□ -0.04
Lig1P37913 Ighv1-62-201ENSMUST00000193406 350 ntBASIC14.79□□□□□ -0.04
Lig1P37913 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Lig1P37913 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC14.79□□□□□ -0.04
Lig1P37913 Ighv8-10-201ENSMUST00000199579 358 ntBASIC14.79□□□□□ -0.04
Lig1P37913 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC14.79□□□□□ -0.04
Lig1P37913 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Lig1P37913 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC14.79□□□□□ -0.04
Lig1P37913 Gm6015-201ENSMUST00000217493 1586 ntBASIC14.79□□□□□ -0.04
Lig1P37913 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lig1P37913 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Lig1P37913 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC14.79□□□□□ -0.04
Lig1P37913 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lig1P37913 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lig1P37913 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Lig1P37913 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lig1P37913 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lig1P37913 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lig1P37913 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lig1P37913 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lig1P37913 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Lig1P37913 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Lig1P37913 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Lig1P37913 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.79□□□□□ -0.04
Lig1P37913 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Lig1P37913 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lig1P37913 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Lig1P37913 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lig1P37913 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lig1P37913 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Lig1P37913 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms