Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfc1P35601 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfc1P35601 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfc1P35601 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rfc1P35601 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfc1P35601 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rfc1P35601 Gm37849-201ENSMUST00000194722 1881 ntBASIC13.74□□□□□ -0.21
Rfc1P35601 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfc1P35601 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfc1P35601 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rfc1P35601 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfc1P35601 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfc1P35601 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Rfc1P35601 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rfc1P35601 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rfc1P35601 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
Rfc1P35601 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
Rfc1P35601 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rfc1P35601 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rfc1P35601 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rfc1P35601 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rfc1P35601 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rfc1P35601 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rfc1P35601 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rfc1P35601 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Rfc1P35601 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rfc1P35601 Gm6415-201ENSMUST00000118488 348 ntBASIC13.73□□□□□ -0.21
Rfc1P35601 Gm12428-201ENSMUST00000119844 727 ntBASIC13.73□□□□□ -0.21
Rfc1P35601 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.73□□□□□ -0.21
Rfc1P35601 Gm26308-201ENSMUST00000157768 69 ntBASIC13.73□□□□□ -0.21
Rfc1P35601 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.73□□□□□ -0.21
Rfc1P35601 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.73□□□□□ -0.21
Rfc1P35601 Gm28630-201ENSMUST00000187806 498 ntBASIC13.73□□□□□ -0.21
Rfc1P35601 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rfc1P35601 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Rfc1P35601 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Rfc1P35601 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rfc1P35601 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rfc1P35601 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rfc1P35601 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rfc1P35601 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC13.73□□□□□ -0.21
Rfc1P35601 AC154404.1-201ENSMUST00000223601 2077 ntBASIC13.73□□□□□ -0.21
Rfc1P35601 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rfc1P35601 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.73□□□□□ -0.21
Rfc1P35601 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rfc1P35601 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rfc1P35601 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rfc1P35601 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rfc1P35601 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.73□□□□□ -0.21
Rfc1P35601 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Rfc1P35601 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfc1P35601 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfc1P35601 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfc1P35601 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Rfc1P35601 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfc1P35601 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rfc1P35601 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rfc1P35601 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
Rfc1P35601 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Rfc1P35601 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfc1P35601 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.72□□□□□ -0.21
Rfc1P35601 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Rfc1P35601 Gm24543-201ENSMUST00000103867 82 ntBASIC13.72□□□□□ -0.21
Rfc1P35601 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Rfc1P35601 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.72□□□□□ -0.21
Rfc1P35601 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.72□□□□□ -0.21
Rfc1P35601 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.72□□□□□ -0.21
Rfc1P35601 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfc1P35601 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfc1P35601 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfc1P35601 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Rfc1P35601 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rfc1P35601 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfc1P35601 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfc1P35601 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfc1P35601 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfc1P35601 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfc1P35601 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfc1P35601 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfc1P35601 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfc1P35601 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfc1P35601 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rfc1P35601 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Rfc1P35601 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rfc1P35601 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfc1P35601 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfc1P35601 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfc1P35601 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Rfc1P35601 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rfc1P35601 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.71□□□□□ -0.21
Rfc1P35601 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rfc1P35601 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rfc1P35601 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rfc1P35601 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rfc1P35601 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rfc1P35601 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rfc1P35601 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rfc1P35601 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rfc1P35601 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC13.71□□□□□ -0.21
Rfc1P35601 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms